Ephemeroptericola cinctiostellae: DTO96_100250
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Entry
DTO96_100250 CDS
T05560
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hyf
Ephemeroptericola cinctiostellae
Pathway
hyf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hyf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DTO96_100250 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyf03021
]
DTO96_100250 (rpoA)
03400 DNA repair and recombination proteins [BR:
hyf03400
]
DTO96_100250 (rpoA)
Enzymes [BR:
hyf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DTO96_100250 (rpoA)
Transcription machinery [BR:
hyf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DTO96_100250 (rpoA)
DNA repair and recombination proteins [BR:
hyf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DTO96_100250 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AXF84541
UniProt:
A0A345D853
LinkDB
All DBs
Position
complement(248517..249503)
Genome browser
AA seq
328 aa
AA seq
DB search
MSKNAFLKPRNIQVEATGEYSAKVVLEPFERGYGHTLGNALRRVLLSSMTGYAATEVQIA
GALHEYSTLDGVQEDVVDILLNVKGIVFKLHSRDEITLTLKKSGEGVVTAADIEGSHEVE
IVNPNHVIAHLAGGELDMQIKIEKGRGYVPGNVRAFADDHSKKIGHIMLDASFSPIRRVS
YAVESARVEQRTDLDKVVMHIDTNGVISPEEAVRQSAAILIEQLSVFAALQNTEDPADAQ
TQRVNAPQFDPILLRPVDELELTVRSANCLKAEAIQYIGDLVRRSEQDLLKTPNLGRKSL
SEIKEVLAARGLTLGMKLENWPPAGLEV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaacgcattcttaaagcctcgcaacattcaagtggaagccacgggtgagtac
agcgcgaaagtcgtcttagaacctttcgaacgcggttatggccacacgttgggtaatgcg
ttgcgtcgtgttttgttgtcttctatgacgggttatgccgcgaccgaagtacaaatcgct
ggtgcattgcatgaatactctacattggatggtgttcaagaagacgtcgttgatattttg
ttaaatgtcaaaggcatcgtgtttaagttacacagccgcgatgaaattacactgaccctg
aaaaaatcaggcgaaggtgtggtgactgcagcggatattgaaggttcacacgaagttgaa
atcgttaaccccaatcacgtgattgctcacttggctggtggcgagctggacatgcaaatc
aagattgaaaaaggccgaggttatgtgccaggtaacgttcgtgcatttgcagacgatcac
agcaagaaaatcggtcacatcatgttggatgcttctttctcgccgattcgtcgtgtgagc
tatgctgttgaatctgcgcgtgttgaacagcgcacggatttagacaaagtggtgatgcac
attgacaccaatggtgtcatcagcccagaagaagcggttcgccaatcggcagcgattttg
attgagcaattgtctgtcttcgccgctttgcaaaacactgaagatccagctgatgcgcaa
acgcaacgtgtgaatgcaccacagtttgatccaatcttgttgcgcccagtggatgagctt
gagctgacggttcgttctgcgaactgcttgaaagctgaagcgattcaatacattggtgac
ttggttcgtcgttctgagcaagatttgctcaaaacgccaaacttgggtcgtaagtcattg
tctgaaatcaaagaagttttggctgctcgcggcttgactttgggcatgaaacttgagaac
tggccgccagctggtttggaagtgtaa
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