Ephemeroptericola cinctiostellae: DTO96_100825
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Entry
DTO96_100825 CDS
T05560
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hyf
Ephemeroptericola cinctiostellae
Pathway
hyf03030
DNA replication
hyf03430
Mismatch repair
hyf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DTO96_100825 (dnaE)
03430 Mismatch repair
DTO96_100825 (dnaE)
03440 Homologous recombination
DTO96_100825 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyf03032
]
DTO96_100825 (dnaE)
03400 DNA repair and recombination proteins [BR:
hyf03400
]
DTO96_100825 (dnaE)
Enzymes [BR:
hyf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DTO96_100825 (dnaE)
DNA replication proteins [BR:
hyf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DTO96_100825 (dnaE)
DNA repair and recombination proteins [BR:
hyf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DTO96_100825 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AXF85106
UniProt:
A0A345D9R8
LinkDB
All DBs
Position
869285..872761
Genome browser
AA seq
1158 aa
AA seq
DB search
MPQPSFVHLRLHSEFSVQDGITRIKDAVKLAAADQQGALALTDLGNTFGLIKFYKAAQGA
GVKPIMGADIWLTNVDDLAQPYRMLLLVKNRAGYLRLCDLLSQAYLQSDRLTHGQIHPDW
LTQHPELNVGLIALSGAHGGDVGQALLKGNVPQAIERVSQWRTAFNHQYYIEVQRLDTND
STQHTLLAAELATVTHTPLVATHAVQFLKPEDHRAHEARVCISQGEILSNPRRQAAFSPC
QYLMTQAEMVERFADLPSAVANSIAIAKQCNLLLDLGKPQLPDFPTPNGETIDDYTRILS
HEGLNERLIKLYPDEDKRAEVRQKYVERLDIELNTIIQMGFPGYFLIVADFITWAKENDV
PVGPGRGSGAGSLVAYALKITDLDPLAYDLLFERFLNPERVSMPDFDIDFCQDGRDSVIQ
YVKDKYGHDAVSQIATFGTLGAKAVVRDVGRVLDMPYNYCDSLSKLIPHDPTDPWTLERT
LKDEPAFKERFETEEEAQEIIALSQPLEGLTRNIGMHAGGVLIAPGKLTDFCPIYCAAGT
NSVVSQYDKNDVEAVGLVKFDFLGLRNLTILKLAVKYLKMLHPDMAHFVLEDLPLDDPKV
FQIFTDGNTTAVFQSESRGAKDLEKKLKPDSFEDIIALMALNRPGPLGSGMVDDFIQRKN
EQKKIGRGKDEWYFHPDLKGTLQSTFGVMVYQEQVMLVAQLLGGYSLGGADLLRRAMGKK
DAAEMARQRDVFAKGAEVHGVKVEVATELFNLMEKFADYGFNKSHSAAYALIAYQTAWFK
AYYPAEFMAATMSSDMDDTDKMQVFYEDSVGLNRLIILPPDINQSFYAFMPTDARHIRYG
LGAIKGAGQAAIEAIVAERQANGAFASFFDFCLRVEKQFINRRTLEALIKAGAFDSLHDN
RASVLASLEHAIEAALHTEQNKHQNSLFDDTQTFDEQWQEQLAQVPAWTLREKLSNEKNA
LGFYVSGHLFDECAAEVNQVVKLRLKDVSPQRETVLIAGIIVAVRTMFTKRGKMMFVTLD
DKTDRLEVSVFNEVFERYSSLLKEDHLVMMQVKVSKDDYSGGVRIVADRVMDLARARASQ
ASQLIIHLDMRDHVLDVTGFKALLRQQVDEEGLGVTVHAQIKGACADIKLGMDWRVVPSD
DLLASLRRLPAVSLVEMV
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgccccagccgtcttttgtccacctccgtttgcactccgagttttcagtccaagatggc
atcacgcgcatcaaagatgcggttaagcttgctgctgccgatcagcaaggtgcgcttgcg
ctgaccgatttgggcaacacctttggtctgattaaattttataaagcggcacaaggcgcg
ggtgtcaagcccatcatgggggcggatatttggttgaccaatgtggatgacttggcgcag
ccgtaccgcatgttgttgctggtcaagaatcgtgcgggttatttgcgcttgtgcgattta
ctcagccaagcctacttgcaatccgatcgtttgacgcatgggcaaatccatcccgattgg
ttgacccagcatccagagctcaatgtgggtttgattgcattgtcgggggcgcatgggggc
gatgtggggcaagctttgcttaaaggcaatgtgccacaagcgattgagcgcgtcagccaa
tggcgcactgcttttaatcaccagtattacattgaagtgcagcgcctcgacaccaatgac
tccacccaacataccctgcttgcggctgagttggcgacggtcacgcacacgcctttggtg
gcgacccatgcggtgcagttccttaagcccgaagaccaccgtgcgcatgaggcgcgcgtg
tgcatctcacaaggtgaaattctgtctaatccacgccgccaagcagcgttttcaccgtgt
caatatttaatgacgcaggcggagatggtggagcggtttgccgatttaccgagcgcggtg
gcgaacagcattgcgattgccaagcaatgcaacctcttgttggatttgggtaagccgcag
ctgcccgatttcccaacgccgaatggcgaaacgattgacgattacacccgtattttatcg
catgaaggcctgaatgaacggctcatcaagttgtatcccgatgaggataaacgcgctgaa
gtgcggcaaaaatatgttgagcgtttggacattgagctcaacaccatcattcaaatgggc
ttccctggttatttcttgattgtggcggatttcatcacgtgggcgaaagaaaatgatgtg
cccgtggggccgggacggggttcgggtgcgggttcgttggtggcgtatgcattaaaaatc
accgatttggatccactggcttatgacttgctgtttgaacggtttttgaatccagagcgg
gtgtccatgcccgactttgacattgatttttgtcaagatggccgcgattcggtaattcaa
tacgtgaaggataaatacggtcacgacgctgtgtcgcagatcgccacatttggtacgctc
ggtgcgaaggcggtggtgcgtgacgtggggcgtgtgctggacatgccgtacaactattgc
gacagcttgtcgaaattgatcccacacgacccaaccgatccgtggaccttggaacgcaca
ctcaaggacgaacctgcttttaaagaacgttttgaaactgaagaagaggcgcaagagatc
atcgcgctgtcgcaaccactcgaaggtttaacgcgcaacattggtatgcatgcgggtggc
gtgttgattgcacccggtaaactcactgatttttgtcccatttattgcgcggcaggcacc
aattcggtggtcagtcagtacgataaaaatgacgtggaagcggttggtctggttaagttt
gactttttgggcttgcgcaacttgaccattttaaaattggcggtgaaatacctcaaaatg
ctgcacccggatatggcacattttgtactggaagatttgccgctggacgaccccaaagtg
tttcaaattttcacggatggcaacaccacggcggtgtttcaatcggagtcgcgcggtgcg
aaagatttggagaaaaagctcaagccagacagctttgaggacatcattgccctgatggca
ttgaatcgacccgggccgctgggttcgggcatggtggatgacttcatccagcgcaaaaac
gaacagaaaaaaattggtcgcggtaaagatgagtggtattttcaccctgatttgaaaggc
acattgcaatcgaccttcggtgtgatggtgtaccaagagcaggtgatgttggttgcgcag
ttgttgggcggctactcgctgggtggtgcggatttgctgcgacgcgcgatgggtaaaaaa
gatgcggcagaaatggcgcgtcaacgcgatgtgtttgccaaaggtgccgaagtgcatggg
gttaaggttgaagtggcgaccgagctgttcaacctgatggaaaaatttgcggattatggt
tttaataaatcccactctgcggcgtatgccttgatcgcttatcagaccgcgtggttcaaa
gcgtattatccagcggaattcatggccgccaccatgtcatcggatatggatgacaccgat
aaaatgcaggtcttttacgaagacagcgtcggcttgaaccgcctcatcatcctaccgcct
gacatcaatcaatctttttatgcgttcatgccgaccgatgcacgtcacatccgctatggt
ttgggcgcgatcaaaggcgcaggacaggcggcgattgaagccatcgtggcggagcgtcaa
gccaatggtgcttttgccagtttctttgatttttgtttgcgggtggaaaaacagtttatc
aatcgccgtacgctggaggctttgattaaagcaggggcttttgacagcctgcacgacaac
cgcgccagcgtcttggccagcttggagcacgcgattgaagcggcgttgcacaccgagcaa
aacaaacaccaaaacagcttgtttgatgacacgcaaacctttgatgagcaatggcaagaa
caattggcacaagtgcccgcatggactttgcgtgaaaaattatccaatgagaaaaatgcg
ctcggtttctatgtcagtggccatttgtttgatgagtgcgccgctgaagtcaatcaagtg
gttaaactgcgtttaaaagatgtgtcgccgcagcgcgaaacggtgctgattgcaggcatc
atcgtcgcagtgcgcaccatgttcaccaagcgcggcaaaatgatgtttgtcaccttggat
gacaaaaccgatcggcttgaagtgtcggtgttcaatgaggtgttcgagcgttattcatca
ttgctcaaagaggatcacctcgtgatgatgcaagtgaaggtctcgaaagacgattacagc
gggggtgtgcgcattgttgctgatcgtgtgatggatttggcacgggcacgcgcatcgcaa
gccagtcaattgatcattcaccttgacatgcgtgaccacgtgctggatgtgacagggttt
aaagccttattgcgccagcaggttgatgaagaggggttgggtgtgaccgttcacgcccaa
atcaaaggcgcatgcgcagacattaagctgggcatggattggcgggtcgtgccaagcgat
gatttgctcgcaagtttgcgtcgattgcctgcggtgagtttagttgaaatggtttga
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