Ephemeroptericola cinctiostellae: DTO96_101005
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Entry
DTO96_101005 CDS
T05560
Symbol
hupB_1
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
hyf
Ephemeroptericola cinctiostellae
Brite
KEGG Orthology (KO) [BR:
hyf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyf03032
]
DTO96_101005 (hupB_1)
03036 Chromosome and associated proteins [BR:
hyf03036
]
DTO96_101005 (hupB_1)
03400 DNA repair and recombination proteins [BR:
hyf03400
]
DTO96_101005 (hupB_1)
DNA replication proteins [BR:
hyf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DTO96_101005 (hupB_1)
Chromosome and associated proteins [BR:
hyf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DTO96_101005 (hupB_1)
DNA repair and recombination proteins [BR:
hyf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DTO96_101005 (hupB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
UBA_HYPK
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
AXF85279
UniProt:
A0A345DA91
LinkDB
All DBs
Position
1082536..1082808
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELVDFIAAEAEVSKAAAGRALDAVTTAVKKTLKKGDSVTLVGFGTFSVGKRAARVG
RNPQTGAEIKIKAAKVPKFKPGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataagtcagaattggtagattttatcgcagcagaagcagaagtttctaaagcagca
gcaggccgtgcattggatgcagtgactacggcagtgaaaaaaaccttgaaaaaaggtgat
tcagttaccttggttggtttcggtactttttcagttggtaagcgtgcagcacgtgttggt
cgtaacccacaaactggcgcagaaattaaaattaaggcagctaaagtgcctaaattcaaa
cctggtaaaggtttgaaagatgcagtaaattaa
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