KEGG   Ephemeroptericola cinctiostellae: DTO96_101552
Entry
DTO96_101552      CDS       T05560                                 
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
hyf  Ephemeroptericola cinctiostellae
Pathway
hyf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hyf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DTO96_101552 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hyf03021]
    DTO96_101552 (rho)
   03019 Messenger RNA biogenesis [BR:hyf03019]
    DTO96_101552 (rho)
Transcription machinery [BR:hyf03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     DTO96_101552 (rho)
Messenger RNA biogenesis [BR:hyf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     DTO96_101552 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 S1CSD-TOTE-2 NACHT Mor AAA_22
Other DBs
NCBI-ProteinID: AXF85812
UniProt: A0A345DBS4
LinkDB
Position
complement(1706793..1708058)
AA seq 421 aa
MHLNELKSLPIKSLVDMALELGIENASRLRKQELMFAVLKRRAKAGESVFGDGTLEVLPD
GFGFLRSPDTSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDNERYFALVKVDKVN
GLAPEHTKHRILFENLTAIHPNTLLPLERDIQSVENITSRIIDIVSPIGLGQRGLIVAQP
KSGKTVMLQNIAHAITANRPDIDLFVLLVDERPEEVTEMQRSVKGEVVASTFDEPATRHV
QVAEMVLEKAKRLAETGKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALVDTGSRMDDVIFEEFKGTGNMELCLDRRMSEKRVYPSISI
NKSSTRREELLLKADVLQKVWILRKFLYEMDDIAAMEFILDKMKQTKNNSEFFDMMKRGG
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcatttaaacgaacttaaatcattacccatcaaatcactcgtcgacatggccctcgaa
ctcggcattgaaaatgccagccgtctgcgcaaacaagaactgatgttcgccgtgctcaaa
cgacgagcaaaagcaggcgaatcggtgtttggcgacggcactctggaagtactgcccgat
ggttttggtttcttgcgctcgcctgatacctcatatctcgccagcaccgatgacatttat
atttcaccgtcgcaaatccgccgtttcaacttgcacacaggcgataccattgaaggtgaa
gtgcgcaccccaaaagacaacgaacgctattttgcccttgttaaagtcgataaagtcaac
ggtttggctccagaacacaccaaacaccgcattttatttgaaaacttgacggcgattcac
ccaaacaccctgctgccactcgaacgtgacattcaatcggttgaaaacatcaccagccgc
atcattgacatcgtttcacccatcggtttgggtcaacgtggtttgattgtcgctcagccc
aaatcaggtaaaaccgtgatgttgcaaaacatcgcccatgcgatcaccgccaatcgccct
gacattgacttgtttgttttgctcgttgatgagcgtccagaagaagtgactgaaatgcaa
cgttcggttaagggtgaagtggtcgcctcaacctttgacgaacctgccacgcgtcacgtg
caagtcgctgaaatggtgctcgaaaaagccaaacgtctcgccgaaacaggcaaagacgtg
gtgatcctgctcgactccatcacccgcctcgcccgcgcttacaacaccgtcattccaagc
tcaggtaaagtattgacaggtggtgtcgatgccaacgccttacaacgcccaaaacgtttc
tttggtgccgcccgcaatattgaagaaggtggctcactgaccatcatcgccaccgcttta
gtggacacgggttctcgcatggatgatgtgatttttgaagaattcaaaggcacgggcaac
atggagctttgcctcgatcgccgcatgtcagaaaaacgtgtgtacccttcgatcagcatc
aataaatcatctacccgtcgtgaagaattattgcttaaagctgatgtgttgcaaaaagtt
tggattttacgtaaattcctctatgagatggatgacatcgctgcgatggaatttattttg
gataaaatgaagcaaacgaaaaacaattcagaattttttgacatgatgaaacgtggcgga
aagtaa

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