Ephemeroptericola cinctiostellae: DTO96_101613
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Entry
DTO96_101613 CDS
T05560
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hyf
Ephemeroptericola cinctiostellae
Pathway
hyf03420
Nucleotide excision repair
hyf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hyf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DTO96_101613 (uvrD)
03430 Mismatch repair
DTO96_101613 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyf03400
]
DTO96_101613 (uvrD)
Enzymes [BR:
hyf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DTO96_101613 (uvrD)
DNA repair and recombination proteins [BR:
hyf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DTO96_101613 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
DTO96_101613 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AXF85873
UniProt:
A0A345DBY5
LinkDB
All DBs
Position
complement(1776759..1778969)
Genome browser
AA seq
736 aa
AA seq
DB search
MNNLEKQMSVLNPTQLQAVTLPAQSALVLAGAGSGKTSVLTTRMAWLISTGQARMPSILA
VTFTNKAAKEMMTRLSGLLPMNTRGMWVGTFHGLCNRFLRAHHRESNLPQTFQILDTADQ
LSAIKRLLKGLQVDTEKFIPKQVQNFINSSKEEGLRSSDVEAKDYFYKKMQEIYAAYEVQ
CQREGVVDFSELLLRAYEVLKANEALRAHYQARFSHILIDEFQDTNSLQYAWLKLLASPQ
TVMMAVGDDDQSIYAFRGAKVENMRDFEREFAQHNVIKLEQNYRSYGHILNAANALIKQN
ANRLGKNLWTDRGHGEPVRIYEAASDYAESDFVIEQIKAQISEGAARKDIAVLYRANAQS
RIIEHALFNAGIPYRVYGGLRFFERAEIKHALAYLRLIDNPHDDTSFMRVVNFPTRGIGT
RTLEQLQDIAKALNSSLWGAVQHATGAGAAKLMAFARMIDSMRFDTEHLPLSELVDHVTT
HSGLMAHYNADKEGADRIENLNELVNAAAAFTQIEGHASDASAAATAEDNTVMSPLAGFL
SHAALEAGDNQAQAGQDAVQLMTVHAAKGLEFDTVFVLGLEEGLFPHENSLSDEGGVEEE
RRLMYVAITRAQTRLYMTLAQQRMLHGKTRYGIKSRFLDELSEDDLKWLTPRVRYDAWAA
TAQTGEVETPSFGSFKETKKDTLGYRVGQSVGHAKFGDGVVVKLEGSGEDTRAYINFGGK
VGIKCLALSIAKLEVR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaataatctcgaaaaacaaatgtctgtcctcaatcccacacagctgcaagccgtgacg
ctacctgcgcaatccgcgctggttctcgcgggggcgggttcgggtaaaaccagtgtgttg
accacgcgcatggcatggttgatcagcacgggtcaggcgcgcatgccgtcgattctggct
gtgacgttcaccaacaaggcggcaaaagaaatgatgactcgcttatcaggcttgttgccg
atgaatacgcgaggcatgtgggtgggtacgtttcatgggttgtgcaatcgttttttacgg
gcgcatcatcgcgaatcgaatttaccacagacttttcaaattttagacaccgctgatcag
ctttcggcaatcaagcgattgctcaaaggtttgcaagtggatactgaaaagttcatcccc
aagcaagtacaaaatttcatcaacagttctaaagaagaaggcctgcgttcgtccgatgtc
gaagcgaaggattatttttataaaaaaatgcaggagatttacgccgcttacgaggtgcaa
tgccagcgcgagggggtggttgatttttctgagttgttgttgcgtgcatatgaagtgctc
aaagccaacgaagctttgcgtgcccattatcaagcgcgattttcgcatatcctgattgat
gaatttcaggacaccaacagtttgcaatatgcgtggctgaagttgctcgccagcccacag
acggtgatgatggcggtgggggatgacgaccaatcgatttatgcgtttcgtggggctaaa
gtcgaaaacatgcgtgattttgaacgtgaatttgcgcaacacaatgtgattaaattggag
caaaactatcgctcttacggtcacattctcaacgcggccaatgctttgattaaacaaaat
gccaatcgtttgggcaaaaacctgtggacggatcgtggtcatggtgagcctgtgcgcatt
tatgaagcggccagcgattatgctgaatcggattttgtcattgaacaaatcaaggcgcag
atcagtgagggcgcggctcgcaaagacatcgccgtgttgtatcgagccaatgcccaatcg
cgcatcatcgagcacgctttattcaatgcaggcatcccataccgcgtgtatggcggcttg
cgtttttttgaacgggctgaaattaaacatgcgttggcctatttgcgtctgattgacaac
cctcatgacgacacatcgtttatgcgcgtagtcaactttcccacgcgcggcattggcact
cgcactttggagcaattgcaagacattgccaaagccctcaactcatccttgtggggggcg
gtgcagcatgccacaggcgcaggagccgccaagctgatggcttttgcccgcatgatcgac
agcatgcgctttgacaccgaacatttgcctttatctgagctggtcgatcatgtgaccacg
cacagtggcttgatggcgcattacaacgccgataaagagggggcagatcgcatcgaaaac
ttgaatgaattggtcaatgccgccgccgcattcacacagattgaaggccatgcctccgat
gcatctgccgccgcaaccgcagaagacaacacggtcatgagcccattggcaggctttctc
agccatgcggcgttggaagcgggcgacaatcaagcgcaagcaggacaagatgcagtgcaa
ttgatgaccgtacatgctgctaaaggtttggagtttgatacagtgtttgttttgggtttg
gaggagggcttgtttccccacgaaaacagtttgtctgatgaaggtggtgttgaagaagaa
cgtcgtttgatgtacgttgccatcacgcgtgcgcaaacccgtttgtacatgactttggca
caacaacgcatgttgcatggcaaaacccgttatggcattaaatcacgcttcttggatgaa
ttgtccgaggatgatctcaaatggctcacacctcgtgtgcgctacgatgcttgggccgca
actgctcaaacgggtgaagtggaaacgccatcgtttggtagtttcaaagaaaccaaaaaa
gacacgcttggttatcgggtcgggcaatcggttggtcatgctaaatttggcgatggtgtg
gttgtcaaactcgaaggcagtggtgaagatacgcgtgcttacattaattttggtggcaaa
gtgggtattaagtgcttggcgttgagtattgcaaagctagaagtgcggtaa
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