Ephemeroptericola cinctiostellae: DTO96_101660
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Entry
DTO96_101660 CDS
T05560
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hyf
Ephemeroptericola cinctiostellae
Pathway
hyf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DTO96_101660 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyf03019
]
DTO96_101660 (pnp)
03016 Transfer RNA biogenesis [BR:
hyf03016
]
DTO96_101660 (pnp)
Enzymes [BR:
hyf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DTO96_101660 (pnp)
Messenger RNA biogenesis [BR:
hyf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DTO96_101660 (pnp)
Transfer RNA biogenesis [BR:
hyf03016
]
Prokaryotic type
tRNA degradation factors
DTO96_101660 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
KH_1
S1
KH_2
KH-I_KHDC4-BBP
DUF5813
Motif
Other DBs
NCBI-ProteinID:
AXF85920
UniProt:
A0A345DC32
LinkDB
All DBs
Position
1829536..1831665
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AA seq
709 aa
AA seq
DB search
MTMFNKVTKTFQYGQHTVTMETGQIARQASGAVVLSMDETVVLATVVAKEQAKSGQDFFP
LTVDYIEKVYAAGRIPGGFFRREGRPSEKETLTSRLIDRPLRPLFPEGFYNEVQVVVQVI
SSNPEVNADIPALLAASAALAVSGIPFAGPVGAARVGYIDGEYILNPTYSQLEKSRMDLV
VAGTEAAVLMVESEAQQLSEEIMLGAVVYGHEQMQAAIDAIYELVKDGGKAEWNWAAPAK
NEALIAKVSELAAAPIAAAYQIRDKQQRTSALREVTTSVSAALTEAGVEFDSVDLGNMLF
DLESNVVRSQILSGQPRIDGRDTRTVRPIEISLGVLPRTHGSALFTRGETQALVVATLGT
KTDEQIVDALEGNSRDRFMLHYNMFPAATGETGRVGSPKRREIGHGRLAKRALAACLPSH
EDFPYTIRVVSEITESNGSSSMASVCGGCLSLMDAGVPMKAHVAGIAMGLIKDGGKFAVL
TDILGDEDHLGDMDFKVAGTVIGLTALQMDIKIQGITKEIMQVALAQAREGRMHILGQME
ASIGGARTEMSSYAPRLYTMKINADKIRDVIGKGGATIRQLTEETGTTIDIQEDGTITIA
SNDAEKAADAQRRITELTAEIEVGKTYDGVVLKILDFGAIVQCFPGKDGLLHISQIAHER
VNAVSDYLKEGQHVKVKATETDDRGRVKLSMKALIERPQSPAAAPEQSQ
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgttcaataaagtcacaaaaactttccaatacggccaacacaccgtcaccatg
gaaacaggtcaaatcgctcgtcaagcatctggcgcagtggttttgtctatggatgaaact
gttgttttagctacagttgtggcgaaagaacaagccaaatcaggtcaagattttttccca
ctgactgtggattacatcgaaaaagtatatgctgctggccgcattccaggtggtttcttc
cgtcgtgaaggccgcccttctgaaaaagaaacattaaccagccgtttaatcgatcgccca
ctgcgccctttattcccagaaggtttttacaatgaagtgcaagtggttgttcaagtcatt
tcttctaatccagaagtcaatgccgacatcccagctttgctcgcagcttctgcggcttta
gcggtttctggcatccccttcgctggccctgttggcgcggcacgcgtgggctacattgat
ggcgaatacatcctcaacccaacgtacagtcaactcgaaaagtcacgcatggacttggtg
gttgcaggcactgaagctgcggtattgatggttgaatctgaagcgcaacaattatcagaa
gaaatcatgttgggcgcggttgtatacggccatgaacaaatgcaagcagcgatcgatgcc
atttatgaattggttaaagatggcggtaaagctgaatggaactgggctgcacctgccaaa
aatgaagctttaattgctaaagtatctgaactcgccgctgcgccgattgctgctgcctac
caaattcgcgacaaacaacaacgtacgtctgcattgcgtgaagtcacaacaagtgtttca
gctgctttgactgaagcaggcgttgagtttgattcggttgacttgggtaatatgctgttc
gacctcgaatccaatgttgttcgttcacaaattttgagtggtcaaccccgtattgacggc
cgtgacacacgcaccgttcgcccaatcgaaatcagcttaggcgttctgccacgcacacac
ggctctgctttgttcacacgcggtgaaacacaagccttggtggttgccactttgggtaca
aaaaccgatgaacaaatcgttgatgcactcgaaggcaacagccgcgaccgtttcatgttg
cattacaatatgttccctgctgcaacaggtgaaacaggccgcgttggttctccaaaacgc
cgcgaaattggccatggccgtttggccaaacgtgcattggcagcgtgcttgccaagtcac
gaagatttcccttacaccatccgtgtggtgtctgaaatcacagaatcaaatggctcatcc
tcaatggcttcggtctgcggtggctgcttgtctttgatggatgcaggcgtgcccatgaaa
gcgcacgtggcgggtatcgccatgggcttgatcaaagacggcggtaaatttgccgtattg
actgacatcttgggcgatgaagatcaccttggtgacatggattttaaagtagcaggtaca
gtgattggcttgaccgcattgcaaatggacatcaaaatccaaggcatcaccaaagaaatc
atgcaagttgcattggcacaagcccgtgaaggccgcatgcacattttgggtcaaatggaa
gcctcgatcggcggcgcgcgcacagagatgtcatcatacgcaccacgcttgtacacgatg
aaaatcaatgcagacaaaatccgtgacgtgattggcaaaggcggcgcaacgattcgtcaa
ttgaccgaagaaacaggcaccaccattgacatccaagaagacggcaccatcaccatcgct
tcaaatgacgctgaaaaagccgctgatgcccaacgtcgcatcactgagttgaccgctgaa
attgaagtgggcaaaacttatgatggcgtggtcttgaaaattttggacttcggcgcgatt
gttcaatgcttcccaggcaaagacggtttactgcacatttctcaaatcgctcacgaacgt
gtcaacgccgtgtctgattacttgaaagaaggccaacacgtcaaagttaaagcgactgaa
acggatgaccgtggccgcgtgaaattgtcaatgaaagcattgatcgaacgtccacaatcg
ccagcagctgctcctgaacaaagccaataa
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