KEGG   Hymenobacter sedentarius: AUC43_00970
Entry
AUC43_00970       CDS       T04242                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
hyg  Hymenobacter sedentarius
Pathway
hyg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hyg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AUC43_00970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hyg03019]
    AUC43_00970
Messenger RNA biogenesis [BR:hyg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AUC43_00970
SSDB
Motif
Pfam: HD RNase_Y_N KH_1 HDOD KH_KhpA-B DUF4954 NttC KH-I_KHDC4-BBP KH_2
Other DBs
NCBI-ProteinID: ALW83797
UniProt: A0A0U4AJY9
LinkDB
Position
219203..220876
AA seq 557 aa
MYCLLTAVVALVAGFVIGKQLAGKARLDHEGQATARAQEILRDAEEKGNRLRDEKIKQAD
ERLEQSKNKFKNLRNEFDVESRRLKQSLEQELTERRQGVVEQEQSIKLLTETTQRQLEQL
QRKEVELEKAREKNQNDTQQLRDKLESQAEKRRLDHEAAMAELEEKQKEAEEQLHSVQRQ
LETIANLTAAEAREQLVESLKNEAQIQASSYVKDTVAQAKLTATKDAKKIVLETIQRTAS
EHAIENCVSIFNIESDDVKGKIIGREGRNIRALEAATGVEIIVDDTPEAIIISGFDPVRR
EIARLSLHLLVKDGRIHPARVEEIVAKTRKNIEEEIVEIGEKTIIDLGIHGLHPELIKMV
GRMRFRSSYGQNLLQHSREVANLCATMAAEMGLDVKKAKRAGLLHDIGKVSTEEPELPHA
ILGMEMAKKWKEHPDVVNAIGAHHDEIEMTAMISPLVQACDAISGSRPGARREMMESYIK
RLKQLEETANGFKGVNQCFAIQAGRELRVMVDAENVTDERAAELSFEISQKIEKEMQYPG
QIKITVIREMRAVAYAK
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgtactgtttgctgaccgcggtggtcgcccttgtggcgggcttcgtgattggcaagcag
ctggccggcaaagcccggctggaccacgaaggccaggccacggcccgggcccaagaaatc
ctccgcgacgccgaggagaaaggcaaccgcctccgcgacgaaaagataaagcaggccgac
gagcgcctggagcagtccaagaacaagttcaagaacctccgcaacgagtttgatgtcgaa
agccgccgcctaaagcagagcctggagcaagagctcaccgagcgccgccaaggcgtagtc
gagcaagagcagagcatcaagctgctcaccgaaaccacccagcgccagctcgagcagctg
cagcgcaaggaagtggagctggaaaaagcccgcgagaaaaaccagaacgacacccagcaa
ctgcgcgacaagctggaaagccaggccgaaaagcgccgcctcgaccacgaagccgctatg
gctgagctggaagaaaagcagaaagaggccgaagagcagctccattcggtacagcgccag
ctcgagaccattgccaacctcacggccgccgaggcccgcgagcagctggtagaatcccta
aaaaacgaagcccagattcaggccagttcctacgtgaaggacaccgtggcccaggccaag
ctgaccgccaccaaagacgccaagaagattgtgctggaaactattcagcgcaccgcttcg
gagcacgccattgagaactgtgtgtcgattttcaacattgaaagcgacgacgttaagggt
aaaatcatcggccgtgagggccgcaacatccgggcgctggaagccgcgacgggcgttgaa
atcatcgtggacgacacgccagaggccatcatcatctcgggcttcgacccggtgcgccgc
gaaattgcccgtctctccctgcacttgctggtgaaggacggccggattcaccccgcccgc
gtggaggaaatcgtggctaagacccgcaagaacatcgaagaggaaatcgtcgaaattggc
gagaagaccatcattgaccttggcattcacggcctgcaccccgagctgattaagatggtg
ggccgcatgcgcttccgctcatcgtacggccaaaacctgctgcagcactcgcgcgaagta
gccaacctctgcgccaccatggccgccgagatgggcctcgacgtgaagaaagccaagcgg
gccggcctgctccacgacatcggcaaggtgagcaccgaggaacccgagctgccccacgcc
atcttgggcatggagatggccaagaagtggaaagagcaccccgacgtggtgaacgccatc
ggcgcccaccacgacgaaattgaaatgactgccatgatttcgccgctcgtgcaggcctgc
gacgccatctcgggctcgcgccccggtgcccgccgcgagatgatggaaagctacatcaag
cgcctcaagcaactcgaagaaaccgccaacggcttcaagggcgtgaaccaatgcttcgcc
atccaggccggccgcgagctgcgcgtgatggtcgacgccgagaacgtgaccgacgagcgc
gccgccgagctgagcttcgaaatttcgcagaagattgagaaggaaatgcagtacccgggc
cagattaaaatcaccgtgattcgggagatgcgcgccgtggcgtacgccaagtaa

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