Hymenobacter sedentarius: AUC43_02115
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Entry
AUC43_02115 CDS
T04242
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
hyg
Hymenobacter sedentarius
Brite
KEGG Orthology (KO) [BR:
hyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyg03032
]
AUC43_02115
03036 Chromosome and associated proteins [BR:
hyg03036
]
AUC43_02115
03400 DNA repair and recombination proteins [BR:
hyg03400
]
AUC43_02115
DNA replication proteins [BR:
hyg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AUC43_02115
Chromosome and associated proteins [BR:
hyg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AUC43_02115
DNA repair and recombination proteins [BR:
hyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AUC43_02115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF4907
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ALW83999
UniProt:
A0A0U3JTJ4
LinkDB
All DBs
Position
complement(493869..494177)
Genome browser
AA seq
102 aa
AA seq
DB search
MTKAEVIAEISTKTGIEKADVLMTVEAFFKVVKDSMTEGNNIYVRGFGSFVNKKRARKVA
RNISKNTSLIIEEHYIPSFKPSKTFVAKIKNSKKVKAVAAKA
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
gtgactaaagctgaggtaatcgccgaaatctctacgaagaccggcatcgagaaagcagac
gtattgatgactgttgaagctttcttcaaagtcgtgaaagattctatgacggaaggcaac
aacatttatgtacgcggctttggctcgttcgtaaacaagaagcgcgcccgtaaagtagcc
cgcaacatctcgaaaaacacgtcccttatcatcgaggaacactacattccgagctttaag
ccttcgaaaaccttcgtggcaaaaattaagaacagcaagaaggtgaaagccgttgctgcc
aaagcctaa
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