Hymenobacter sedentarius: AUC43_02430
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Entry
AUC43_02430 CDS
T04242
Name
(GenBank) hypothetical protein
Organism
hyg
Hymenobacter sedentarius
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP_3
FG-GAP
Cadherin
BBS1
PKD_4
HYR
Cadherin_4
fn3
Por_Secre_tail
Big_9
TcdB_toxin_midN
CopC
E1_DerP2_DerF2
HYR_4C
Motif
Other DBs
NCBI-ProteinID:
ALW84057
UniProt:
A0A0U4C746
LinkDB
All DBs
Position
568114..573651
Genome browser
AA seq
1845 aa
AA seq
DB search
MRSIRCFSAYRLWLLLAALLPVAARAQAPAITGFTPTSGPAGTSVSVTGTDLSGVTAVAV
NGTAGTLTSTGTALGFTFAPGVGSTSGALTLATASGGATSAPNPVLRLQGTGGTSSDNTV
YIDQVEIIDANGAVVPGGVANGSFESGAPAADIVYNPTTVTGWAFASPGFSIGNAAIATA
NSPFYPPTPPDGTHIALFQLRDGYVEQALSLGAGTYRVRFLMAQRQCCALPYDQAMRVLI
NGVAVGAALTTSSSSYVQVTSLPFTVSTAGTFIVPPLPTVVSTSPARNALAAGRAANVAL
TYGQAANAALAASVRVYSQQAGGRKALAATASGNTVTLDPSTDFKPGETVYVTSPAGAAK
PYVYQFTAQAGAGSGTFAGTQNVPVGSGPQSVAVGDVDGDGDLDLVTANTGNSTVSVRLN
GGDATGSNTGAFAGGQNVSVGASPYCVALADVDGDGDLDLLAANANNGSGTVSVRLNGGD
ATGSNTGVFTGTRNVPVGINPYCVVLADVDGDGDPDLVTANAGNTTVSVRLNGGDATGSN
TGVFTGTQNVPVGASPRGVALADVDGDGDLDLLAANANNNTVSVRLNGGDATGSNTGAFS
GTQTVPVGANPQSMAVADVDGDGDLDLVTANTGNSTVSVRLNGGDATGSNTGAFAGTRNV
PVGSGPYCVALADVDGDGDLDLVTANIGSSTVSVRLNGGDATGSNTGAFAGTQNVPVGAS
PRGVALADVDGDGDLDLLAANYSSGTVSVRLNQETAPAITSFSTNPAAPGTLVTLSGTNL
TGATALVINGTAATILSNTGTAITFNVPAGATATGSSSVATPAGTANSAAFAVLQAPVLA
ATTGATAAPEQTVTAVDAGMTVNDADGTTLASATVSLSSGLVPAEDVLAFVPAGNITGAY
DAATGVLNLASAAPYATLADWQAVLQSITYLNTADAPTAADRTVSFVVNDGGLDSNPATK
LVQVQAVNDAPGSPTDADAAPNAVAENATPGTPTGLTVTATDADNATLTYSLTDDANGRF
VIDATTGVVTVANRAGLDFEVATSYTITAQATDGSLTSSAAFVINVSDVNEAPVVANQSY
TTQEDGAAGTVVGTVLATDPDAGQALTYTLTAGNTNGAFALVGNQLQVANSAALDYAATP
SFALTVSVTDNGTPTLASTATLTVTLTPAPCAAPTSLAVGGIGTSTASVSFLGTATATGG
YTVRYATAGQPAQSLTSATSPVALTGLLPNTAYDVTVTSTCSRTQTAASTTVSFTTLCQI
PALAAIANQSVNVGANACGASVSFSASASGTPAPSVTFTLGGAAIASPYVFPVGISTITA
TASSCGGIATRTFTVTVTDNVNPTITAPVAKVVSTDAGQCSATGIALGSPVTADNCTVQS
VTNNAPASFGKGNTTVTWTVTDASGNTATATQLVTVVDNQAPTITAPANLSLANDAKACA
RALATVALGTPAAADNCGTVTVTNNAPTSFPVGTTTVTWTVTDGSNRTSTATQLVTITNA
APVLGDIAGPGAPLSIAAATVSLSANFIDNNLTAATWTWDDGGTSAGTLSGATVSGSHAY
TTPGVYKVGLTVRDACGLSATTFYEYVVVYDPNGGFVTGHGAIASPMNPALPFMQVGGTA
KFGFVAKYAKGSTTQVDGNTGFEFKAGNLDFESTSLTATRLVIAGERANYKGVGTINGAG
TYGFLVAAIDGDYNGGTGPDRFRIKIWNTATSAVVYDNQAGADENDPATTAISYGAIIIQ
TPKSSAPANLVEATETATLTAATFGAYPNPVHEQTTAAFAFDQDEDYAVEVYDVTGRLVQ
RLQAGHAAAGQLVQVTWTPGNAATGVYSLRLVTKHGVQQLRLVRQ
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcagcatccgctgcttttcggcctacaggctatggctgctgcttgcggcgctgctg
ccggtggcggcgcgggcccaggcccctgccatcacaggctttacgcccactagcgggccg
gccggcaccagcgtcagtgtgacgggcaccgacctgagcggggtaaccgccgtggccgtg
aacggcacagcgggcaccctcaccagcacgggcacggccctgggtttcaccttcgcgccg
ggcgtgggctccaccagcggggccctcacgctggccacggccagcggcggggccacctcg
gcccccaaccccgtgctgcgcctgcaaggcaccggcggcaccagctccgacaacacggtg
tacatcgaccaggtggaaatcatcgacgccaacggcgcggtggtgcccgggggcgtggcc
aacggcagcttcgagagcggcgccccggccgccgacatcgtgtataacccgaccacggtc
acgggctgggcctttgctagccccggcttcagcatcggcaacgcggccatcgccactgcc
aacagtcccttctacccgcccacgccgcccgacggcacccacattgccctgtttcagctg
cgggacgggtacgtggagcaggccttgagcctgggcgcgggcacctaccgggtgcgcttc
ctcatggcccagcgccagtgctgcgccctgccctacgaccaagccatgcgcgtgctgatt
aacggcgtggccgtgggcgcggccctcaccaccagcagcagcagctacgtgcaggtcacg
tccctgccgttcaccgtgtccacggccggtacgttcatagtgccgccgttgccgacggtg
gtgagcacttcgcccgcgcgcaacgccctggccgccgggcgcgccgccaacgtggccctg
acgtatggccaggctgcgaacgcggccctggccgccagcgtgcgcgtgtactcccagcag
gccgggggccgcaaagccctcgccgccacggccagcggcaacaccgtgaccctggacccg
agcaccgacttcaagcccggcgaaacggtctacgtcacctcgcccgccggcgcggccaag
ccctacgtgtaccagttcacggcccaggccggcgccgggtccggcaccttcgccggcacc
cagaacgtgcccgtgggcagcggcccccagagcgtggccgtgggcgacgtggacggcgac
ggcgacctcgacctggtgaccgccaacactggcaacagcacggtgagcgtgcgcctgaac
gggggcgacgccacgggctcgaacacgggcgccttcgccggtggccagaacgtgtccgtc
ggcgccagcccctactgcgtggccctggccgacgtggacggcgacggcgacctcgacctg
ctcgcggccaacgccaacaacggcagcggcacggtgagcgtgcgcctgaacgggggcgac
gcgacgggcagcaatacgggcgtcttcaccggcacccggaacgtgcccgtgggcatcaac
ccctactgcgtggtcctggccgacgtggacggcgacggcgaccccgacctggtgaccgca
aacgctggcaataccacggtgagcgtgcgcctgaacgggggcgacgccacgggctcgaac
acgggcgtcttcaccggcacccagaacgtgcccgtcggcgccagcccccgcggcgtggcc
ctggccgacgtggacggcgacggcgacctcgacctgctcgcggccaacgccaacaacaac
acggtgagcgtgcgcctgaacgggggcgacgccacaggctcgaatacgggcgccttctcc
ggcacgcaaaccgtgcccgtgggcgccaacccccagagcatggccgtggccgacgtggac
ggcgacggcgacctcgacctggtgaccgccaacactggcaacagcacggtgagcgtgcgc
ctgaacgggggcgacgccacgggctcgaacacgggcgccttcgccggcacccggaacgtg
cccgtgggcagcggcccctactgcgtggccctggccgacgtggacggcgacggcgacctg
gacctggtgacggccaacattggcagcagcacggtgagcgtgcgcctgaacgggggcgac
gccacgggctcgaacacgggcgccttcgccggcacccagaacgtgcccgtcggcgccagc
ccccgcggcgtggccctggccgacgtggacggcgacggcgacctcgacctgctcgcggcc
aactacagcagcggcacagtgagcgtgcgcctaaatcaggaaacggcccccgctatcact
agcttcagcacaaacccggccgcccccggcaccctggtcaccctcagcggcaccaacctc
actggggccacggccctggtcatcaacggaacggcggctaccatcttaagcaacaccggc
acagccatcacctttaacgtaccggccggggccacagccaccggcagcagcagcgtggcc
acgcccgctggcaccgccaatagcgcagccttcgcggtgctgcaagctcccgtgctggct
gccacgaccggcgctacggccgcccccgagcaaaccgtcaccgccgtggacgctggcatg
accgtgaacgacgccgacggcaccaccttggcttcggccaccgtcagcctcagcagcggc
ctggtgccggctgaggacgtgctggccttcgtgcccgccggcaacatcaccggtgcctac
gacgccgccaccggcgtgctcaatttggcttcggccgcgccctacgccacgctggccgac
tggcaggccgtgctgcaaagcatcacctacctcaacaccgccgacgcccccaccgccgcc
gaccgcacggtcagcttcgtggtgaatgacggtggcctcgacagcaaccccgccaccaag
ctggtgcaggtgcaggccgtgaacgacgcccctggttccccgaccgacgccgacgcggcc
cccaacgccgtggctgagaatgcaactcccggcacccccacgggccttaccgtgacggcc
accgacgcggacaacgccaccctgacttacagcctgaccgacgacgccaacggccgcttc
gtcatcgacgccaccaccggcgtggtgaccgtggccaaccgtgccgggctcgactttgaa
gtcgcgaccagctacaccatcaccgcccaagccaccgacggcagcctgaccagcagcgcc
gccttcgttattaacgtgagcgacgtgaacgaggccccggtagtagccaaccagtcctac
accacccaggaagacggcgccgccggcaccgtggtgggcaccgtgctcgccaccgacccc
gatgcgggccaggccctgacctacacactcacggccggcaacaccaacggggccttcgcc
ctggtgggcaaccagctgcaagtcgccaattcggcggccctcgactacgccgccacgccc
agctttgccctcacggtaagcgtgaccgacaacggcacccccaccctcgccagcaccgcc
accctaacggtgaccctgacgcctgcaccctgcgctgcgcccaccagcctggccgtaggc
ggcatcggcacgagcacggccagcgtgagcttcctgggcaccgccaccgccactggcggc
tacaccgtgcgctacgccactgcgggccagccggcccagtccctgaccagcgccacctcg
ccggtggccttgaccggcctgctgcccaacactgcctacgacgtgaccgtgaccagcacc
tgcagccgcacccaaactgcggcttcgacgaccgtttccttcaccacgctctgccagatt
ccggcgctggccgccatagccaaccaaagcgtgaacgtgggcgctaacgcctgcggtgcc
tcggtgagcttctcggcttcggccagcggcacgccggccccgagcgtaactttcaccctc
ggcggcgcagccattgcttcgccttatgtgttcccggtgggcatttccaccatcacagcc
acggccagcagctgtggcggcatcgccacccgcaccttcaccgtgacggtgactgataac
gtgaacccaactattacggcccccgtggccaaagtggtatcaaccgacgccggccagtgc
tcggccactggcatagccctgggctccccggtcacggcggataactgcaccgtgcagagc
gtgaccaataacgcccccgcttcctttggcaagggcaacacgacggttacctggaccgtg
accgacgcttccggcaacacggccaccgccacccagctggtgaccgtggtcgacaaccag
gccccgaccatcacggccccggccaacctctcgctggccaacgacgccaaagcctgcgcc
cgcgccctggccaccgtagcgctgggcacgcccgccgccgccgacaactgcggcactgtg
acggtgaccaacaatgccccgaccagcttcccagtgggcaccaccaccgtgacctggacg
gtaaccgacggcagcaaccgcacctctacggccacgcagctggtgaccatcaccaacgcc
gcgcccgtgctgggcgacatcgccggccccggcgctccgctgagcatcgcggccgccacg
gtctcgctctcggccaacttcatcgacaacaacctgacggcggccacctggacctgggac
gacggcggcaccagcgccggcaccctgagcggcgccaccgtgagcggcagccacgcctac
accacgcccggcgtgtacaaggtgggcctgaccgtgcgcgacgcctgtggcctatcggcc
acgacgttctacgaatacgtggtggtgtacgaccccaacggcggcttcgtcaccggtcac
ggcgccattgcctcgccgatgaatccggccctgcccttcatgcaggtgggcggcacggcc
aagttcggctttgtggccaagtacgccaaaggttccaccacccaggtcgatggcaacacc
gggtttgagttcaaagccggtaacctggacttcgaaagcacctccctgacggcgacgcgc
ctggttattgccggagaacgcgccaattacaagggcgtgggcaccatcaacggcgccgga
acctacggcttcctggtggccgccatcgacggcgactacaacggcggcacgggcccggac
cggttccgcatcaaaatctggaacacggccaccagcgccgtggtgtacgacaaccaagcc
ggggccgatgagaatgacccggccacgacggccatcagctacggagccatcatcatccag
accccaaaaagcagcgcccccgccaatcttgttgaggcgaccgaaacggcaaccctgacg
gccgccaccttcggcgcttaccccaacccggtacacgagcaaaccaccgctgcctttgct
ttcgaccaagacgaggactacgcggtggaagtgtacgacgtgacgggccgcctagtgcag
cgcctgcaagcgggccacgcggcggcgggccagctcgtccaggtcacttggacgccgggc
aacgcggccacgggcgtgtacagcctgcgcttggttaccaagcacggggtgcagcagctg
cgcctggtccggcaataa
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