Hymenobacter sedentarius: AUC43_03845
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Entry
AUC43_03845 CDS
T04242
Name
(GenBank) alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
hyg
Hymenobacter sedentarius
Pathway
hyg00300
Lysine biosynthesis
hyg00470
D-Amino acid metabolism
hyg00550
Peptidoglycan biosynthesis
hyg01100
Metabolic pathways
hyg01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hyg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AUC43_03845
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AUC43_03845
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AUC43_03845
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AUC43_03845
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyg01011
]
AUC43_03845
Enzymes [BR:
hyg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
AUC43_03845
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
AUC43_03845
Peptidoglycan biosynthesis and degradation proteins [BR:
hyg01011
]
Precursor biosynthesis
Amino acid ligase
AUC43_03845
Racemase
AUC43_03845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Mur_ligase_C
SIP
Motif
Other DBs
NCBI-ProteinID:
ALW84305
UniProt:
A0A0U4BVK5
LinkDB
All DBs
Position
complement(910930..913494)
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AA seq
854 aa
AA seq
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MFVFSALPALIAGHLLQSPADPAVEVRHLVLDSRRVGLPAGALFFALRGPSHNGHRYLPE
LYDQGVRLFVVEETAELPGSLSAYPGAGIIAVKSPLAALQALAAAHRAEFSGPVLAITGS
NGKTIVKEWLAQLLSPDEDICRSPRSYNSQVGVPLSAWELNPERHTLGIFEAGISEVGEM
ARLAAIIQPTEGIFTNLGTAHDAGFASSQHKLAEKLQLFQGPQFRRLFYCYDQPLVRAAV
AQRNIPGLSWTRHAGQPADLYFALDPNSTSGITSLHARYARVRLEAAFTLPFSDEPSIEN
ALHCLAVLLHRQVEPAEIQRRLARLHPVAMRLEMKLGRHDSYLLDDTYNNDLAGLALALN
ALSRQSRPGRRTLILSDVLESGLSGEELYARVAALLPPAGVTRLVGIGPEINRYRHFFTL
APPAGHPPLTADFYPDTEAFLASLDPNAFAREVILVKGARRFGFERIVAALQAQQHGTVL
EVNLDALSHNLQHYRRRLQPGTKLMVMVKAFAYGAGSYEVASLLEFQRADYLAVAYADEG
VALREAGISLPIMVMNPAPDSFSTLQHYRLEPEIFSFDMLNEYLAAFPAEAQPSAAQPLS
HSVAPPPIHLKLDTGMRRLGFDEADLPALAALLQQHPARLPVASLMTHLAAADEAEHDDF
TRTQLAAFRRMAAVLEAALGHAVLKHALNSAGILRFPEAHFDMVRLGIGLYGVDASGRDA
AALRPVSQLRTTISQIKTLPGGHTVGYGRRGAATEAERRIATLAIGYADGYDRRFGNGAG
TVLIHGQRAPLVGSVCMDMCMVDVTHIPQARAGDVALVFGEGLPLPELAARIGTIAYELL
TNVSERVKRVFVSE
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgtcttttctgctctcccggccctgatagccggccacctgctccagtcccccgcc
gaccccgccgtcgaggtgcgccacctggtgctcgacagccgccgggtggggttgcccgcc
ggggccttattttttgctctgcgcggccccagccacaatggccaccgctacttgcccgag
ctctacgaccagggggtgcggctgtttgtagtagaagaaacggccgaactgcccggcagc
ctcagcgcgtatcccggcgccggcattattgccgtgaaaagcccgctcgcagccttgcag
gctctggccgctgcccaccgcgccgaattcagtggccccgtgctagccatcaccggctcc
aacggcaagaccattgtgaaggagtggctggctcaactcctgagccccgacgaggacatc
tgccgctcgccacgctcctacaactcgcaggtgggcgtgccgctgagcgcgtgggaactg
aatcccgaacgccacacgctgggcattttcgaggccggcatttcggaagtaggggagatg
gcgcgcttggccgccatcattcagcccaccgaagggatttttaccaacctgggcacggcc
cacgatgccggctttgcctccagccagcataagttggccgagaagctgcagctattccag
ggcccccagtttcggcggctgttttactgctacgaccagccgctggtgcgcgctgccgtg
gcccaacgaaacatcccgggcttgagctggacgcgccacgccggacagcccgccgacctc
tacttcgcgctcgaccccaatagcaccagcggcatcaccagcctgcatgcccggtacgcc
cgcgtgaggctggaagccgcgtttacgctgcctttctccgacgagccgtctatcgaaaac
gccctgcactgcctggccgtgctgctgcaccggcaggttgagccggccgaaattcagcgc
cgcctcgcccggctgcaccccgtggccatgcgcctggagatgaagctggggcgccacgac
tcctacctgctcgacgacacctataacaacgacctcgccggcctggccctggccctgaac
gcgctgagccggcagtcgcgccccggtcgccgcaccctgattttgagcgacgtgctcgaa
tcgggcctgagcggagaggagctgtatgcccgtgtggcggccctgctgcccccggccggc
gtaacgcgcctcgtcggcattggccccgaaatcaatcggtaccgccacttctttaccctg
gcgccgcccgcaggccacccgccgctaaccgctgacttctaccccgataccgaagccttc
ctggcctcgctcgaccccaatgcctttgcccgcgaagttatcctggtaaagggcgcccgg
cgctttgggttcgagcgcattgtggccgccctgcaggcccagcagcacggcaccgtgctg
gaagtcaacctcgacgcgctcagccacaacctgcagcactaccgccgccggctgcagccc
ggcaccaagctcatggtgatggtgaaggcctttgcctacggcgctggctcctacgaagtg
gccagcctgctcgaatttcagcgggccgactacctcgccgtggcctacgccgacgaaggc
gtggccctgcgcgaagccggcatcagcctgcccattatggtgatgaacccggcaccggac
tcgttcagcacgctgcagcactaccgcctggagcccgaaatcttttccttcgacatgctg
aatgagtacctggccgctttcccggcggaagcgcagccctcagccgctcagccactcagc
cactccgtcgctcccccgcccatccacctcaagctggataccggcatgcgccgcctgggc
ttcgacgaagccgacctgcccgcgctggccgccttgctgcagcagcacccggcccgcctg
cccgtggccagcctcatgacccaccttgccgccgccgacgaagccgagcacgacgacttc
acccgcacgcagctggccgctttccggcgcatggccgccgtgctggaagccgcgctgggc
cacgccgtgctcaagcacgccctgaactcggccggcatcctgcgcttccccgaagcccac
ttcgacatggtgcgcctcggcatcggcctctacggcgtagatgccagcggccgcgacgcc
gcggccctgcgcccggtgagccagctgcgcaccaccatttcccaaatcaaaaccctgccc
ggcggccacaccgtgggctacggccgccggggcgcggccacggaggccgagcgccgcatt
gccacgctggccatcggctacgccgacggctacgaccgccgcttcggcaacggcgcgggc
acggtgctcatccacgggcagcgggcgccgctggtgggctcggtatgcatggatatgtgc
atggtcgacgtgacccacattccgcaggcccgcgccggcgacgtggccctggtctttggc
gaggggctgccgctgccggagttggccgcccgcatcggcaccattgcctacgagctgctc
accaacgtgagcgagcgggtgaagcgggtgtttgtgagcgagtaa
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