Hymenobacter sedentarius: AUC43_04495
Help
Entry
AUC43_04495 CDS
T04242
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hyg
Hymenobacter sedentarius
Pathway
hyg03410
Base excision repair
hyg03430
Mismatch repair
hyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AUC43_04495
03430 Mismatch repair
AUC43_04495
03440 Homologous recombination
AUC43_04495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyg03400
]
AUC43_04495
DNA repair and recombination proteins [BR:
hyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AUC43_04495
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AUC43_04495
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AUC43_04495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ALW87225
UniProt:
A0A0U4CGB7
LinkDB
All DBs
Position
complement(1059009..1060715)
Genome browser
AA seq
568 aa
AA seq
DB search
MPEPDGYKAHSLTEALFIAAEVAALLVQRGIDTPEAAAAFFHPDLRQLPNPLLMRDMDRA
VARLTQAYHAGEKVLVLGDYDVDGITSVATVVSYLTPLFGAERLRDYIPDRYTEGYGISE
KAIDFAAANGFQLIVALDCGIKAVAQVAYATSQGVDFIICDHHLPGEELPAAVAVLDPKR
ADCEYPYKELSGCGVGFKLMQALGERLGLPEARLHDLLDLVTVSIAADIVPITGENRILA
AHGLRRFNEDAHLLRPGLAALRELATLREGPLGISSLIFGFAPRINAAGRMGDARRAVAM
LLAPDQQEARYTAEVVDQMNQQRRGSDQHTTQEALDMIAGSPTLQNARATVLYKSDWHQG
VLGIVASRCLDQYYRPTVILTQRDGKATGSARSVAGFDVHEALEACAPLLDQFGGHRAAA
GLTLKVENVPAFQRRFEEVVADTLTTEHLVRPVEVAAALPLSRINEEFFSELRRMEPFGP
GNPNPVFASRRLVAVPNSARVVGQGHLKLRLASADTSGPAVDAIGFGLADYLTEIELGQP
FSACYTVELNEYRGQRSVQLRLLDVRWE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atccccgaaccggatggctataaggcccacagcctcaccgaggccttatttattgccgcc
gaagtagcggctctgctggtgcagcggggcatcgacacgcccgaggccgccgcggccttt
ttccaccccgacctgcgccagctgcccaacccgctgctgatgcgtgacatggaccgcgcc
gtggcccgcctcacgcaggcctaccacgccggcgaaaaggtgctggtattgggcgattac
gacgtggacggcattacctccgtggccacggtggtgagctacctcacgccgttatttggc
gcggagcggctgcgcgactacatcccggaccgctataccgaaggctacggcatctccgaa
aaggccattgattttgccgcggccaacggcttccagctcatcgttgcgctggactgcggc
atcaaagccgtcgcgcaggtagcctacgctaccagccaaggcgttgacttcatcatttgc
gaccaccacctgcccggcgaagaactgcccgcagccgtggccgtgctcgaccccaagcgg
gccgactgtgaatatccgtacaaggagctgtcgggctgtggggtgggcttcaagctgatg
caggcgttgggcgaacgcctgggcttgcccgaggcgcggctgcacgacctgctggatttg
gtgacggtgagcattgcggccgacatcgtgcccatcaccggcgaaaaccgcatcctggcc
gcccacggcctgcggcgcttcaacgaagacgcccacttgctgcggccagggctggcggcc
ctgcgcgagctggccacgctgcgcgagggcccgctgggcatcagcagcctgatattcggc
tttgcgccgcgcattaatgcggccggccgcatgggcgatgcgcgccgcgccgtggccatg
ctgctcgcccccgaccagcaggaggcccgctacaccgccgaagtggtggaccagatgaac
cagcagcgccgcggctccgaccagcacaccacccaggaggcgctggacatgattgccggc
agccccacgctgcaaaacgcccgcgccaccgtgctttacaagtccgactggcaccagggc
gtgttgggcatcgtggcctcgcgctgcctcgaccaatactaccgtcccaccgtcatcctc
acccagcgcgatggcaaggccacgggctcggcccgctccgtggcggggttcgacgtacac
gaagccctggaggcctgcgccccgctgctcgaccagttcggtgggcaccgcgccgcggcc
ggcctcacgttgaaggtggaaaacgtgccggctttccagcggcggtttgaggaagtggtg
gccgataccctcaccaccgaacacctcgtgcggccggtggaagtggcggcggcgctgccc
ctgagccgcatcaacgaagagtttttttcggagctgcgccgcatggagccgttcgggccg
ggcaaccccaatcccgtgtttgcgtcgcggcggctggtggccgtgcccaatagcgcccgg
gtggtggggcaggggcacctcaagctacgcctggcctcggccgatacgtcggggccggcc
gtggacgccatcggtttcggcctggccgactacctgacggaaattgagctaggccagccg
ttcagcgcgtgctataccgttgagctaaacgagtaccgcggccagcgcagcgtgcagctg
cggctgctggacgtgcgctgggagtag
DBGET
integrated database retrieval system
