Hymenobacter sedentarius: AUC43_04860
Help
Entry
AUC43_04860 CDS
T04242
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hyg
Hymenobacter sedentarius
Pathway
hyg03030
DNA replication
hyg03410
Base excision repair
hyg03420
Nucleotide excision repair
hyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AUC43_04860
03410 Base excision repair
AUC43_04860
03420 Nucleotide excision repair
AUC43_04860
03440 Homologous recombination
AUC43_04860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyg03032
]
AUC43_04860
03400 DNA repair and recombination proteins [BR:
hyg03400
]
AUC43_04860
Enzymes [BR:
hyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AUC43_04860
DNA replication proteins [BR:
hyg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AUC43_04860
DNA repair and recombination proteins [BR:
hyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AUC43_04860
NER (nucleotide excision repair)
GGR (global genome repair) factors
AUC43_04860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
RNase_H_2
HHH
Motif
Other DBs
NCBI-ProteinID:
ALW84471
UniProt:
A0A0U4BM68
LinkDB
All DBs
Position
complement(1152551..1155436)
Genome browser
AA seq
961 aa
AA seq
DB search
MPDQPAAPAKKLFLLDAFALIYRSHFAFSKNPRINSKGMNTGAVLGFTNTLVEVLQKEKP
THIGVCFDGPKKTFRHDQFAAYKAQRQAMPEDIGIAIPYIKKIIQAFHIPVLMLDGFEAD
DVIGTLAQRAEAQGFEVYMMTPDKDYCQLVTEHIKIYRPAFMGNAAEILDVDHVLARFEI
ERVEQVIDILGLQGDASDNIPGIPGIGEKTAKALIKQYGSVENLLANVDQLKGKQQENVR
NFAEQGLMSKELATIHVNVPLPFEPDALVLDAPDEAKLRELFDELEFRQLAARVLSGGPP
RTPASVAKPGTTGARRPRVAAGQASLFANPGDEAIAIAAEEGETGRYGAPSGPRKRLEDV
PYQYHLIDTPELRKMLLGFLLQQTEVSFDTETTGLDIMTARLVGLSFCWLPGEAYYVPVP
TDDEQAAQAIVDEFCPFFEAEHILKIGQNVKYDLTILRHYNVEVSGQLFDTMLAHYLIEP
DMRHNMDVLAETYLHYSPVSILELIGPKGKKQKTMADIPPAEVKDYACEDADVTLQLKHV
FEPMLQDLGLLGLLNDVENPLVPVLSSIEYEGVRIDSNAMNEYSAELQGYISELETQIFR
EAGQEFNIGSPKQLGEVLFDKMQIGGGKIKKTKTGQYATGEEILSLLAADNPIVALILEY
RQLTKLRSTYVEALPQLVCVADGRVHTNFNQAVTATGRLSSTNPNLQNIPIRTEKGREIR
KAFVPRDENHVLLAADYSQVELRIMADFSGDKTMIEAFRQGLDIHASTASKVFKVPIEEV
DSDMRRKAKTVNFGIIYGISAFGLAQRIGIGRKEATDIIETYFQEFPSVKQFMDESINKA
RELEYAETLLKRRRYLRDINSRNATLRGYTERNAINAPIQGTAADIIKMAMINIYHWLRE
EKLQTRMILQVHDELVFDAVKEEVAYITPKIKELMTHALLLPRGVPLEVEVGTGDNWLQA
H
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaccaacccgccgctcctgccaaaaaactcttcctgctcgacgcctttgcgctg
atttaccgctcgcacttcgcgttcagcaaaaacccgcgcatcaactccaagggcatgaac
acgggcgccgtgctcggcttcaccaacacgctggtggaggtgctgcaaaaggagaagccc
acccacatcggggtgtgctttgacggcccgaagaagaccttccgccacgaccaatttgcg
gcctacaaggcccagcgccaggccatgcccgaagacatcggcatcgccattccctacatc
aagaaaatcatccaggccttccacattccggtgctgatgctcgacggctttgaggccgac
gacgtgattggcaccctggcccaacgggccgaggcccagggctttgaggtgtacatgatg
acgcccgacaaggactactgccagctggtgacggagcacatcaaaatctaccgcccggcc
ttcatgggcaacgcggccgaaatactggacgtcgaccacgtgctggcccgcttcgaaatt
gagcgggtggagcaggtgattgatattctgggcttgcagggcgacgcctccgacaacatt
cccggcattcccggtatcggcgaaaagacggccaaggccctgataaagcagtacggctcg
gtggaaaacctgctggccaacgtggaccagctcaagggcaagcagcaggaaaacgtgcgc
aactttgccgagcagggcctgatgagcaaggagctggctaccattcacgtgaacgtgccg
ctgcccttcgagcccgacgcgctggtgcttgatgcccccgacgaagccaagctgcgcgag
ctgttcgacgagctggaattccggcagcttgcggcccgggtgcttagcggcggcccgccc
cgcaccccggccagcgtggccaagcccggcaccaccggcgcccggcgcccgcgggtggcg
gccggccaggcctcgctctttgccaaccccggcgacgaagccattgccatcgccgccgag
gaaggcgaaaccggccgctacggcgcgcccagcggcccgcgcaagcgcctggaagacgtc
ccctaccagtaccatttgattgacacgcccgagctgcgcaagatgctgttgggcttcctg
ttgcagcaaaccgaggtcagcttcgacaccgaaaccaccgggctggacatcatgacggcg
cggctcgtggggctgagcttctgctggctgccgggcgaggcctactacgtgcccgtgccg
acggatgatgagcaagccgcccaggccattgtggacgagttctgcccgtttttcgaggcc
gagcacattctcaaaattgggcagaacgtgaagtacgacctcactattctgcggcactac
aacgtggaggtgagcggccagctgttcgacaccatgctggcccactacctcatcgagccc
gacatgcgccacaacatggacgtgctggccgaaacctatctgcactactcgccggtttcc
attcttgagctgattgggcccaagggcaagaagcagaaaaccatggccgacatcccgccc
gccgaggtgaaggattacgcctgcgaagacgccgacgtgaccctgcagctcaagcacgtg
ttcgagcccatgctacaagaccttgggctgctgggcttgctcaacgacgtggaaaacccg
ctggtgccggtgctctctagcatcgagtacgagggcgtgcggattgattccaacgccatg
aacgagtactcggccgagctgcagggctacatttcggagctggaaacccagattttccgc
gaagccgggcaggagttcaatatcggctctccgaagcagttgggcgaggtgctgtttgat
aaaatgcagattgggggcggcaaaattaagaaaaccaagaccggccaatacgccaccggc
gaggaaatcctgagccttttggccgccgacaaccccatcgtggcccttattctggagtac
cgccagctcaccaagctgcgctcgacctatgtggaggcgctgccccagctggtgtgcgtg
gccgacggccgcgtgcacaccaacttcaaccaggccgtgaccgctaccggccgcctgagc
agcaccaaccccaacctgcagaacatccccattcgcacggaaaagggccgggaaatccgc
aaggccttcgtgccgcgcgacgaaaaccacgtgctgctggcggccgactactcgcaggtg
gaactgcgcatcatggccgacttctccggcgacaagaccatgattgaagccttccgccaa
gggctcgatattcacgccagcacggccagcaaagtcttcaaagtgccgattgaggaagtg
gacagcgacatgcgccgcaaggccaaaaccgtcaactttggcatcatctacggcatttcg
gcctttggcctggcccaacgtatcggcatcggccgcaaggaagctaccgacatcatcgag
acctacttccaggaattcccgtcggtgaagcagttcatggacgagagcatcaacaaggcc
cgcgagctggagtacgccgaaacgctgctcaagcgccgccgctacctgcgcgacatcaac
tcgcgcaacgccacgctacgcggctacaccgagcgcaacgccatcaacgcccctattcag
ggcacggccgccgacatcatcaagatggccatgattaacatctaccactggctgcgcgaa
gagaagctccaaacccgcatgattctgcaggtgcacgacgaattggtgttcgacgctgtg
aaagaggaagtggcctacatcacccccaaaatcaaggagctgatgacccatgcgctgctg
ctgcctcgcggtgtgccgctagaggtggaagtaggcaccggcgataactggctgcaagcg
cactag
DBGET
integrated database retrieval system
