Hymenobacter sedentarius: AUC43_05715
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Entry
AUC43_05715 CDS
T04242
Name
(GenBank) hypothetical protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
hyg
Hymenobacter sedentarius
Brite
KEGG Orthology (KO) [BR:
hyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyg03000
]
AUC43_05715
Transcription factors [BR:
hyg03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AUC43_05715
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_24
HTH_Tnp_ISL3
HTH_11
TLN1-like_RS
HTH_38
HTH_3
HTH_IclR
HTH_28
HTH_5
MarR
HTH_23
HTH_Crp_2
Mga
Motif
Other DBs
NCBI-ProteinID:
ALW84624
UniProt:
A0A0U4AM27
LinkDB
All DBs
Position
complement(1388281..1389339)
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AA seq
352 aa
AA seq
DB search
MAAKKQQTSIRDLAQQLNLSISTVSRALADHRDISEATKQRVRQLAQELSYRPNQLAAAL
RKGHSKTLGVIVPHIKGYFFPAVMNGIEKVATCEGFNVMMCQSNEDLHREQRNVETLIDA
QVEGILISVSATTHLDVQHFEQVRRQGIPLVFFDRVPELPQSMAVILDDFQGAFQAVSHL
IAQGCTHIAHMAGPQHLNTTRNRYLGYREALRAHGLAYEEHWNYSLPALTHEAGRLGMQH
LLALDSSLDAVFAAYAIPTVGALEVLREQSMRVPQDIALACFSNDPFTAMTQPQLTVIDQ
RPEQMGETAVRLFLQLLKRGPVYTPPHLILKPELVIRNSSLHRSQESMVPMR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaagaagcagcagacttccatccgggatttagcccaacagctcaacttatcc
atctcgacggtttcgcgggcgctggctgaccaccgggatattagcgaggccaccaagcag
cgcgtgcggcaactggctcaggagttgagctaccggcccaaccagctggcagcggcgttg
cgcaaaggccatagcaagacactgggggttattgtgccgcacatcaagggctacttcttt
ccggccgtgatgaatggcattgagaaagtggcgacctgcgaaggcttcaacgtgatgatg
tgccaatcgaacgaggacctgcaccgggagcagcgcaacgtggaaaccttgattgatgcg
caggtggagggcatacttatttcggtctcagctactacgcacctcgatgtccagcacttt
gagcaggtgcgacggcagggcattccgttggttttctttgaccgcgtgccggagctgccg
caaagcatggccgttattctggatgactttcagggcgccttccaagccgtatcccacctg
attgcgcagggatgcacccacatcgcgcacatggccgggccgcagcacctgaatactacc
cgcaaccggtacctgggctaccgcgaagccctgcgcgctcatggtctggcctatgaagag
cactggaactactccctacccgcgctgacgcacgaggccggccgcctgggcatgcagcat
ttgttggccttagactcttccctggatgcggtttttgccgcttatgccattcccacggtg
ggggcgctggaggtactgcgggagcagtcgatgcgcgtgccgcaggacattgccctggcg
tgcttcagcaacgacccatttacggctatgacgcagccgcagctaacggttatcgaccag
cggcctgagcagatgggcgagacggcggtgcggctttttctgcagctgctgaagcgaggg
ccggtttatacaccgccccacctcattcttaagcctgagctggttatccgtaactcatcg
ctgcaccgctcgcaagagagcatggtgccgatgcgctaa
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