Hymenobacter sedentarius: AUC43_06155
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Entry
AUC43_06155 CDS
T04242
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hyg
Hymenobacter sedentarius
Brite
KEGG Orthology (KO) [BR:
hyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyg03009
]
AUC43_06155
Enzymes [BR:
hyg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AUC43_06155
Ribosome biogenesis [BR:
hyg03009
]
Prokaryotic type
ribosomal protein modification factors
AUC43_06155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ALW84699
UniProt:
A0A0U4BDP0
LinkDB
All DBs
Position
complement(1503775..1505088)
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AA seq
437 aa
AA seq
DB search
MKVRNQTTNKVNVITLGCSKNIVDSEVLMGQLQANDFDVTHEAEQSDANIVIINTCGFID
NAKQESIDTILRYADEKEAGRLDKLYVTGCLSQRYKDELEVEIPQVDAYFGTLELPQMLK
VLNADYKHELIGERLITTPRHYAYFKIAEGCNRPCSFCAIPLMRGKHVDRPIEDLVKEAK
RLAGMGTKELILIAQDLTYYGLQAYGERKLADLLRNLSDVNGIDWIRLQYAYPSQFPLDA
LDVMAERDNICKYLDMPLQHGSDNMLKTMRRGITKRRTMELVDTIRQRVPGIALRTTLIA
GHPGETELDFREMYDFVEQTRFERLGIFTYSHEENTHSHTLVDDVPAELKQERADAIMEL
QQGISMELNEARVGQTYKVLFDRKESGHFVGRTEFDSPEVDNEVLVPVEKDTFVRLGDFA
NVKITSATDFDLYGHLD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttagaaatcaaaccaccaacaaagtaaacgtcattaccctgggctgctccaag
aacatcgtggacagcgaagtgctgatgggccagctccaggccaacgacttcgacgtgacc
cacgaagccgagcagtcggacgccaacattgtgattatcaacacctgcggctttatcgac
aacgccaagcaggagagcatcgacaccatcctgcgctacgcggatgagaaggaagccggc
cgcctcgacaaactctacgtgacgggctgcctctcgcagcgctacaaggacgagctggag
gtagaaatcccccaggttgatgcctatttcggcaccctggagttgccccagatgctgaag
gtgctcaacgccgactacaagcacgaactgattggcgagcgcctcatcaccacgccgcgc
cactacgcctacttcaaaatcgccgagggctgcaaccgcccctgctcgttctgcgccatc
ccgctgatgcgcggcaagcacgtggaccgccccatcgaggacctggtgaaagaagccaag
cgcctggccggcatgggcaccaaggagctgattctcattgcccaggacctgacttactac
ggccttcaagcctacggcgagcgcaagctggccgacttgctgcgcaacctatccgacgtg
aacggcatcgactggattcgcctgcagtacgcctacccttcgcagttcccgctggatgcg
ctggacgtgatggccgagcgcgacaacatctgcaagtacctcgacatgcccctgcagcac
ggctccgacaacatgctcaaaaccatgcgccgcggcatcaccaagcgccgcaccatggag
ctggtggacaccattcggcagcgggtgccgggcattgccctgcgcaccacgctcattgcc
ggccaccccggcgaaaccgagttggacttccgcgagatgtatgattttgtggagcagacg
cgcttcgagcgcctgggcatcttcacttactcgcacgaggaaaacacgcactcgcacacc
ttggtagacgacgtgcccgccgagctgaagcaggagcgcgccgatgccatcatggagctg
cagcagggcatttcaatggagctgaacgaagcccgcgtgggccagacctacaaggtgctg
ttcgaccgcaaggaaagcggccacttcgtaggccgcaccgagtttgactcgcccgaagtg
gacaacgaagtgctggtgccggtggaaaaagacacgtttgtgcgcctcggcgactttgcc
aacgtgaaaatcacctcggctacggactttgacttgtacggccacttggattag
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