KEGG   Hymenobacter sedentarius: AUC43_07170
Entry
AUC43_07170       CDS       T04242                                 
Name
(GenBank) ABC-ATPase UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
hyg  Hymenobacter sedentarius
Pathway
hyg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hyg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AUC43_07170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hyg03400]
    AUC43_07170
DNA repair and recombination proteins [BR:hyg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AUC43_07170
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AUC43_07170
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N nSTAND1 AAA_29 DnaJ_CXXCXGXG AAA_16 AAA_21 RsgA_GTPase AAA_25 AAA_15 nSTAND3 Viral_helicase1 CA109-like Parb-CE
Other DBs
NCBI-ProteinID: ALW87267
UniProt: A0A0U3T2U2
LinkDB
Position
1743952..1746780
AA seq 942 aa
MEVYGAREHNLKNVSVKIPRNRLVVFTGISGSGKSSLAFDTIYAEGQRRYMETFSAYARS
FMGGLERPDVDKIEGLSPVISIEQKTTSRNPRSTVGTITEIYDFLRLLYARTAEAYSYAT
GKKMIRQSDDQIINYILRHFDGKKLVVLAPVVKGRKGHYREDFQKIAKLGFTKVRVDGEL
LDITPKMQVDRYKIHDIEIVIDRLVVKEEDRFRLSGSVQNALMHGKGTMLVLDPDAKKAQ
PQFFSRFLMDPTTGIAYDDPAPNTFSFNSPYGACPTCNGLGEVQEITEESVMPDRKLSIA
RGGIAPLGDYRDIWIFQQLQVILKKHKATLNTPIDKLPEDLLKRLLHGISEDEADDSKSQ
YTEAFEGIIPFLRRQMDSESDNIREWIAQYAQAQTCPECQGYRLKKESLHFRMADKHIGE
LSVMDLNDLAGWFEGLEDRLTERQNVIARELLKEIRKRIGFLLEVGLDYLNLHRPVRTLS
GGESQRIRLATQIGTQLVGVLYIMDEPSIGLHQRDNERLIKALQHLRDIGNSVIVVEHDK
DMILHADHVLDIGPGAGIHGGHIVASGTPKEILNSGSLTSQYLSGQKHIEMRKKKRKGEG
AELVLKGAKGNNLKNVTLKVPLGKLVAVTGVSGSGKSTLIHDTLYPILNQHFFNAKKEPL
AYSAIEGLDLVDKVIEVDQSPIGRTPRSNPATYTGVFTEIRQLFGEMAEAKIRGYGPGRF
SFNVKGGRCETCEGAGIRTIEMNFLPDVHVPCETCKGRRYNRETLEVRFKGKSITDILDM
TVEKAVEFFEFQPRILRKIKTLNDVGLGYLTLGQQATTLSGGEAQRVKLATELSKKDTGK
TFYILDEPTTGLHFEDINHLADVLQKLADKGNTVLIIEHNLDLIKVADHVIDIGPEGGAG
GGTIVAQGTPEQVAKSDKGHTARFLAEELKISKYSEAKAEKA
NT seq 2829 nt   +upstreamnt  +downstreamnt
atagaagtgtacggcgcccgcgagcacaacctcaaaaacgtgtcggtcaagattccgcgc
aaccggctggtggtgttcacgggcatctcgggctcgggcaagtcgagcctggccttcgat
accatttatgccgaggggcagcgccgctacatggagacgttctcggcctacgcccgcagc
ttcatgggcgggctggaacggcccgacgtggacaagattgagggcctgtcgccggttatc
agcatcgagcagaagaccacctcgcgcaacccgcgctccacggtgggcaccatcaccgag
atttacgacttcctgcgcctgctctacgcccgcaccgccgaggcctacagctacgccacg
ggcaagaagatgattcggcagagcgacgaccagattatcaactacatcctccggcacttc
gacggcaagaagctggtggtgctggcgccggtggtgaaaggccgtaaaggccactaccgc
gaagatttccagaagattgccaagctgggcttcaccaaagtgcgcgtggatggcgagttg
ctcgacatcacgcccaagatgcaggtggaccgctacaagattcacgacatcgaaatcgtg
attgaccggctcgtggtgaaggaagaggaccggttccgcctcagcggctcggtgcagaat
gcgctgatgcacggcaagggcaccatgctggtgctcgacccggatgcgaaaaaagcgcag
ccgcagttcttctcgcgcttcctgatggacccaaccaccggcatcgcctacgatgacccg
gcgcccaacaccttcagcttcaactcgccctacggcgcctgccccacctgcaacggtctg
ggcgaggtgcaggaaatcacggaagaaagcgtgatgcccgaccgcaagctgagcattgcg
cgcggcggcatcgcgccgctgggcgactaccgcgacatctggattttccagcagctgcag
gtcatcctcaaaaagcacaaggccacgctgaacacgcccatcgacaagctgcccgaggac
ctgctcaagcgcctgctccacggcatctcagaagacgaggccgacgacagcaaaagccag
tatacggaggccttcgagggcattattccctttctgcgccggcagatggactccgagtcg
gacaacatccgcgagtggatagctcaatatgcccaagcacagacctgccccgaatgccag
ggctaccgcctgaaaaaggaaagcctgcacttccggatggccgacaagcacatcggcgag
ctgtcggtgatggacctgaacgacctggctggctggtttgaggggctggaagaccggctc
accgagcgccagaatgtcattgcccgcgagctgctcaaggaaatccgcaagcgcatcggc
ttcctgctggaagttgggctggattacctgaacctgcaccgcccggtgcgcacgctgagc
ggcggcgaaagccagcgcattcgcctcgccacccagattggcacccagctcgtgggcgtg
ctctacatcatggacgagccgagcatcggcctgcaccagcgcgacaacgagcgcctcatc
aaggccctgcagcacctgcgcgacatcggcaactcggtgattgtggtggagcacgacaag
gacatgattctgcacgccgaccacgtgctcgacattggccctggcgcgggcattcacggc
ggccacatcgtggcctcgggcacgcccaaggagattctgaactccggctcgctcacctcg
cagtacctgagcgggcagaagcacatcgaaatgcgtaagaaaaagcgcaagggcgaaggt
gctgaactggtgctgaaaggcgccaagggcaacaacctcaaaaacgtgaccctgaaagtg
ccgctcggcaagctggtggccgtgacgggcgtatcgggctcgggcaaatccacgctcatc
cacgacacgctgtacccgattctgaaccagcacttcttcaacgccaagaaggagccgctg
gcctacagtgccatcgaagggctggatttggtggataaagtgattgaagtggaccagtcg
cccatcgggcgcacgccgcgctcgaacccggccacctacacgggcgtgttcaccgaaatc
cgccagctgtttggcgagatggccgaagccaagattcgcggctacggccccgggcgcttc
tctttcaacgtaaagggcgggcgctgcgaaacctgcgaaggcgcgggcattcggaccatc
gagatgaacttcctgcccgacgtgcacgtgccctgcgagacctgcaaaggccgccgctac
aaccgcgaaacgctcgaagtgcgcttcaaaggcaagtccatcaccgacattctggacatg
acggtggaaaaggccgtggaattcttcgaattccagccccgcatcctgcgcaaaatcaaa
acactgaacgacgttgggctgggttacctcacgttgggccagcaggccaccacgctctcg
ggcggcgaggcccagcgcgtgaagctcgccaccgagctcagcaaaaaagacaccggcaag
acgttctacatcctcgacgagcctaccaccggtctgcacttcgaagacatcaaccacctg
gccgatgtgctgcaaaagctggccgacaagggcaacaccgtcctcatcatcgagcacaac
ctggacctgattaaggtagccgaccacgtcatcgacatcgggcccgaaggcggcgcgggt
ggcggcaccattgtggcccagggtacgcccgagcaggtagccaaatccgacaaaggccac
acggcccgcttcctggccgaggaactgaaaatcagcaagtacagcgaggccaaagcggag
aaagcttaa

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