Hymenobacter sedentarius: AUC43_07260
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Entry
AUC43_07260 CDS
T04242
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
hyg
Hymenobacter sedentarius
Brite
KEGG Orthology (KO) [BR:
hyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyg02000
]
AUC43_07260
Transporters [BR:
hyg02000
]
Other transporters
Pores ion channels [TC:
1
]
AUC43_07260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF748
AsmA
SymE_toxin
Motif
Other DBs
NCBI-ProteinID:
ALW84905
UniProt:
A0A0U4C9R7
LinkDB
All DBs
Position
complement(1765905..1771157)
Genome browser
AA seq
1750 aa
AA seq
DB search
MSTFFRRALYGLLGLLALVLVLVVAVVVVLQFPAGQDFVAHRAESYLRGKLKTEVRIGKF
RTDFRHAINLDGVYLADQQRDTLLSVGHLGVDLDILALLHSQINVSNVELNDGRVRLTRT
EPDSANNYDFIIDAFVDPNAPTDTTASKLKYDIGKLRLTNIYFTQNDQITGSDVRARLGE
LTVNMDEVDVDKSIYKVDNAALRRAYIAIVQTKTAPEVDNPGPTEPLTLQFGLNKATLDS
VAFTYKNNPAAQFISTNIGLADITARNIDLRNERIDLTKLTLKNTRFAYAQNENVPVEER
VVNPAEAVRKLDEAADKTKAATGQPLKWRVTLAQSDISGLDVAFDNFNQPKQRTRLPAMD
YNHLHFSDLVLNTRDFSFSENRTTAKVDNLAGREQSGFLVNKWRADVVYDSVQIRLDSLD
LITPHTRIRRTLAIGYESLAALGNSKNLPNLKIEGDLRNVRLGFRDILYLAPDLASTSPF
NTGPNQSVLLNGQIAGRVGNFTVRNLEFVGLRNTVLRARRGRIQGLPNVDSRLYADLDIQ
QFSTTEADIRSLVPKGSIPTNISIPQSLAVSGTFRGRPTTLQFNTNLQLRSTYGDMAFSG
NLGAAQANGRQPVVGTFATKGFDFGRLLKNPQLGRVTATGRINATGNLKDPGTLVGQVNA
NVQSARYNGYNYHGVVAKVDLDRNRYVISANSKNDPNLNLDLQAVVNLRDPRNPTYEVTS
LNLRGANLTALGFYTGGDLRVQGNLNANLTGSSLNTLNGTFRGTNVVLVRDNQPFAFDTL
SAKITQTATRAALDFTSNIVAAKLDGNVHLGDLAPELEQHLDRYFDLPGVRYVPSAADRH
FTYAVQLKDGKLATKLVPGLKQISPFTLAGDYSRQAARLTANTSIPIIRYNNYRIDSLRL
NVGSDASKLDYGLRMAQAAQDTTLKLRRPSIIGNVANNKVFTRAAILGDSSTHERLALAG
TLQSLPVPGRRDQVIYQFSAAPEQVLNYQNWTAGPNNYVRYYPTGAVVADGLRLTNGRSS
LALQSQNPAVPTSPLGVTFTNFELAELARIVQQQDSLVAGTLNGTARIDNLGTKRQAFTA
DATVNNLVFQKAAIGDIALRATNPAPSRYDVDARLTGGAAGSVGGSGNDVHLTGTYLASS
ATPLNFTVDANRLNLKLVEPFSVGQVRSATGFVHGQLSVTGAPATPQIRGTLTTSDDAGF
TVPQLGSPFRLPNQDLTFDNRGIAFHNFTVLDSASNKAVANGYLLTKDFINYSFDMRATT
NNFMAVRSTRANNELFYGRLVLDSDTRLTGPVSLIKVDTRVTVVEGSNLTVESPNATPTA
VERAGVVEFIDKSAPLDTMLARKVALDTTKVDATGYDLTAVVTINDRTPFTIVIDPVSGD
NLRVRAAGTLNTNIAPDGTITLSGRLDVARGQYHMSLYDLASRDFIIRRGSSITWDGDPY
NADLNVTALYKVRAAPAELLAGQGTDDPTSNTLARNRLPFNVLLNVTDQISKPTIGFDIT
LPENQRGALSGQVEAKLAQLRQPTQNSEMSKQVFSLLVLGRFVAQNPFQTSSGEGVVASQ
LRGSASAVLTDQLNNITDKYLSGLGLDLGLTNQADYSSGEARSRTDLNVAVRRQLLNNRL
TVRVGTDIALSGNTGTQTTTGQTPPSNLAGDVSLEYSLLADGRLRVRVFRQNAYEDIDGQ
IVRTGAGLVFQREYRDLADLFSKVPKSIKEERKENRKQEKVEKKAEQDSVQSQPTARVDT
SRVKPTAKNR
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
ttgtccactttttttcgccgtgccctttacggactgctagggctcctggccctggttctg
gtcctcgtagtagctgtagtggtggtgttgcaatttcccgcggggcaggattttgtggcc
caccgggccgaaagctacctgcgcggcaagctcaagacggaggtacgcatcgggaaattt
cgcaccgatttccgccacgccatcaacctcgacggcgtgtacctggccgaccagcagcgc
gacaccctgctgtcggtgggccacctcggcgtcgacctcgacatcctggcgctgctgcac
agccaaatcaacgtgtcgaacgtggagctgaacgacggccgcgtgcgcctgacccgcacc
gagcccgactcggcaaacaactacgacttcatcatcgatgccttcgtggaccccaacgcg
cccaccgacaccacggcctccaagctcaagtacgacatcggcaagctgcggctcaccaac
atctacttcacccaaaacgaccagataaccggctccgacgtgcgcgcccgcctcggcgag
ctcacggtgaatatggacgaggtagatgtggataagtctatctacaaagtggataacgcg
gccctccgtcgagcttacattgccattgtgcaaaccaaaacggccccggaagtggataac
cccggccctaccgagccgctcacgctccagtttggcctaaataaggcgaccctcgacagc
gtggcctttacttataagaacaaccccgcagctcaatttatcagcaccaacattgggctg
gccgacatcacggcccgcaacattgacctgcgcaacgagcggattgacctcaccaagctt
accctcaaaaacacgcgcttcgcctacgcccaaaacgaaaacgtgcccgtggaagaacgg
gtggtgaaccctgccgaggccgtgcgcaagctcgacgaagccgccgacaagaccaaggcc
gccaccggccaacccctgaagtggcgcgtgaccctggcccaatccgacatcagcggcctg
gacgtggccttcgacaacttcaaccagcctaagcagcgcacccgcctgccggccatggac
tacaaccacctccacttctcggatttggtgctgaacacgcgggacttttccttttccgaa
aaccgcaccacggccaaggtagacaacctggccggccgcgagcaaagcggatttctggtg
aataagtggcgcgccgatgtggtgtacgactcggtgcaaatccgcctcgacagcctcgat
ttgattacgccgcacacccgcatccggcgtacgctggccattggctacgaaagcctggcg
gccctgggcaactccaagaacctgcccaacctgaagattgaaggcgatttgcgcaacgtg
cgcctcggcttccgcgacattctgtacctggccccggacctggccagcacctccccgttc
aataccggccccaatcagtcggtgctgctgaacgggcagattgccgggcgcgtgggcaac
ttcacggtgcgcaacctggagtttgtggggctgcgcaacacggtgctgcgcgcccggcgc
ggccgcatccagggcctgcccaacgtggactcgcggctgtacgccgacctcgatattcag
cagttcagcaccaccgaggccgatatccgcagcttggtcccaaagggtagtattccaacc
aacatcagcattccgcagtcgctggccgttagcggcacgttccgggggcgacctactacg
ctgcagttcaacaccaacctacagctgcgcagcacctacggcgacatggcgtttagcggc
aacctgggggcggcgcaggccaacggccgccagccggtggtgggcacgtttgccaccaag
gggtttgactttggccggctgctgaaaaacccgcagctgggccgcgtcacggccaccggg
cgcatcaatgccacgggcaacctgaaagaccccggcacgctggtgggccaggtgaatgcc
aacgtgcaaagcgcccgctacaacggctacaactaccacggcgtggtggccaaggtggac
ctcgaccgcaaccgctacgtcatcagcgccaacagcaagaacgaccccaacctgaacttg
gacctgcaggccgtagtgaacctgcgcgacccgcgcaaccccacctacgaagtgacctcg
ttgaacctgcgcggcgccaacctcacggccctgggcttctacaccggcggcgacctgcgc
gtgcagggcaacctcaacgccaaccttaccggctccagcctcaacaccctcaacggtacc
ttccggggaaccaacgtggtgctggtgcgcgacaaccagccctttgccttcgatacgctg
agtgccaaaatcacgcagacggccacgcgggccgcgctggatttcacctccaacatcgtg
gccgcgaagctcgatggcaacgtgcacctcggcgacctggccccggagctggagcagcac
ctcgaccgctacttcgacctgcccggtgtgcgctacgtgcccagcgccgccgaccgccac
ttcacctacgccgtgcagctgaaagacggcaagctggccaccaagctggtgcccggcctc
aagcagatttcgccctttacgctggccggcgactacagccgccaggccgcccgcctcacg
gccaacaccagcattcccatcatccggtacaacaactaccgcatcgattcgctgcgcctg
aacgtgggctccgacgccagcaagctcgattatggcttgcgcatggcccaggccgcgcag
gacaccaccctaaagctgcgccgccccagcatcatcggcaacgtggccaacaataaggta
ttcacccgcgcggccatcctcggcgattcttctacccacgagcggctggcgctggccggc
acactgcagtccttgcccgtgcccggccgccgcgaccaggttatttaccagttttcggcc
gcccccgagcaggtgctcaactaccagaactggacggctggccccaacaactacgtgcgc
tactaccccaccggcgccgtggtggccgatggcctgcgcctcaccaacggccgcagcagc
ctggcgttgcaaagccagaacccggccgtgcccacttcgccgctgggcgtcacgtttacc
aattttgagctagccgagctcgcccgcatcgtgcagcagcaggactccttggtggccggc
acgctcaacggcacggcccgcatcgacaacctgggtactaagcgccaggccttcacggcc
gatgccacggtgaataacctggtgtttcagaaagccgccatcggcgacattgccctgcgg
gccaccaaccccgcccccagccgctacgacgtggacgcccgcctcaccggcggcgcagcc
ggcagcgtgggcggcagcggcaacgacgtacacctcacgggcacctacctggccagcagc
gccaccccgctcaacttcaccgtggatgccaaccggctcaacctgaaactagtggagccg
ttctcggtgggccaggtgcgcagcgccaccggcttcgtgcacgggcagctgagcgtgacc
ggcgcgcccgccacgccccagattcgcggcacgctcaccacttccgacgacgccggcttt
accgtgccgcagctgggctcgcccttccgcctgcccaaccaagacctcacgtttgacaac
cggggcattgccttccacaacttcaccgtgctggattcggcctctaacaaagccgtggcc
aacggctacctgctaaccaaggacttcatcaactactccttcgacatgcgggccacgacc
aacaacttcatggccgtgcgcagcacccgcgccaacaacgagctgttctacggccgtttg
gtgctcgattcggacacgcgcctgaccgggccggtttcgctcatcaaagtcgacacccgg
gtgacggtggtggagggctcaaacctgaccgtggaatcgccgaatgccacgcccacggca
gtggagcgggcaggcgtagtggagttcatcgacaaaagcgccccgctcgataccatgctg
gcccgcaaagtggcgctggacaccaccaaggtagacgccaccggctacgacctgacggcg
gtggttaccatcaacgaccgcacgccgtttaccatcgtcatcgacccggtgagcggcgat
aacctgcgcgtgcgggccgccggcaccctcaacaccaacattgcgccggacggcaccatc
accctgagcgggcggctcgacgtggcgcgcggccagtaccacatgtcgctctacgacctg
gcctcgcgcgatttcatcatccgccggggctcgtccatcacctgggacggcgacccctac
aacgccgacctcaacgtgacggccctgtacaaggtgcgggccgcgcccgccgagctgctg
gccggccagggcaccgacgaccccaccagcaacaccctcgcgcgcaaccgcctccccttc
aacgtgctgctgaacgtgactgaccaaatcagcaagcccaccattggcttcgacatcacg
ctgcccgaaaaccagcgcggcgccctgagcgggcaggtagaagccaagctggcccagctg
cgccagcccacccagaactcagaaatgagcaagcaggtgttttcgctgctggtgctgggc
cgtttcgtggctcagaaccccttccagaccagcagcggcgagggcgtggtggccagccag
ctgcgcggcagcgccagcgccgtgctcaccgaccagctcaacaacatcaccgacaagtac
ctctcgggcctgggcctggacctgggcctcaccaaccaggccgactacagctcaggcgag
gcccgcagccgcaccgatctgaacgtggccgtgcgccgccagctgctcaacaaccgcctc
accgtgcgcgtgggcaccgacattgccctgagcggcaacaccggcacccaaaccaccacc
ggccagacgccccccagcaacctggccggcgacgtgagcctggaatactcgctgctggcc
gatggccgcctgcgggtgcgcgtgttccgccagaatgcttacgaggatattgatggccaa
atcgtgcgcacgggcgccggcctggtgttccagcgcgagtaccgcgacctggccgacctg
ttctcgaaagtgccaaaaagcatcaaggaagagcgaaaagagaaccgcaagcaggaaaaa
gtggagaagaaggccgagcaggattccgtccagagccagcccacggcccgggtcgacact
tcgcgggtgaagccgaccgccaagaaccgttaa
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