Hymenobacter sedentarius: AUC43_08100
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Entry
AUC43_08100 CDS
T04242
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hyg
Hymenobacter sedentarius
Pathway
hyg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hyg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AUC43_08100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyg03021
]
AUC43_08100
03400 DNA repair and recombination proteins [BR:
hyg03400
]
AUC43_08100
Enzymes [BR:
hyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AUC43_08100
Transcription machinery [BR:
hyg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AUC43_08100
DNA repair and recombination proteins [BR:
hyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AUC43_08100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ALW87276
UniProt:
A0A0U4AGA8
LinkDB
All DBs
Position
1940201..1941190
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPEKVVMEKSDDFTGTFEFKPLEKGYGVTIGNALRRILLSSLEGFAITSVRTN
SVLHEFSTIEGVIEDMSEIILNLKMVRFKKTSDAIADKITVRVKGQETFSGSDIGKFASG
FEVLNPDHVIAHIDPSKELEFELTIARGRGYVPADENKPADQVFGQIAIDAIYTPIKNVK
YSIENTRVEQKTDYEKLVIEIQTDGSIHPEEALKGAANILIQHFMLFSDNTMTLEGPRVT
EDEPIDEETMQMRKMLKTPLEDMELSVRAKNCLKAADIKTMGELVQLEIADMMKFRNFGK
KSLTELENLVEERGLEFGMDLGKYRLEED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcttagcttttcagatgccggagaaagtggtgatggagaaatccgacgacttc
accgggacgtttgaatttaagccgctcgagaagggctacggcgtcaccatcggtaatgcg
ctgcgtcgcattctgttgtcgtcgctggagggtttcgccatcacgtcggttcgcacgaac
agcgtgttgcatgagttttcgaccatcgaaggtgtgattgaggacatgtccgaaatcatc
ctgaacctgaaaatggtccgcttcaagaagaccagcgacgccattgctgataaaattacg
gtgcgcgtgaaaggtcaggagaccttctcgggcagcgacattggcaagtttgccagcggc
ttcgaggtgctcaaccccgaccacgtgattgcgcacatcgaccccagcaaagagttggag
tttgagttgacaattgcccgtggccgtggctatgtacccgccgacgagaacaagccagct
gaccaggttttcggtcaaattgctatcgatgctatctacacgcctattaagaacgtgaag
tacagcattgagaacacccgtgtggagcaaaagaccgactatgagaagctcgttattgag
attcagaccgacggttcaattcatccggaggaagcactaaaaggtgcggccaacatcctc
attcagcactttatgctgttctcggataacacgatgaccctcgaaggtcctcgcgtgacc
gaagacgagccgattgatgaggaaaccatgcagatgcgcaagatgctcaagactcccctg
gaggacatggagctcagcgtacgcgccaagaactgcctcaaggctgccgacatcaaaacg
atgggtgaattggtacagctcgaaatcgctgacatgatgaagttccgcaacttcggtaag
aagagcttgaccgagttggagaacctcgttgaggagcgcggcctggagttcggcatggac
ttgggcaagtaccgcctcgaagaagactag
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