Hymenobacter sedentarius: AUC43_11560
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Entry
AUC43_11560 CDS
T04242
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hyg
Hymenobacter sedentarius
Brite
KEGG Orthology (KO) [BR:
hyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyg03016
]
AUC43_11560
Enzymes [BR:
hyg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
AUC43_11560
Transfer RNA biogenesis [BR:
hyg03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
AUC43_11560
Prokaryotic type
AUC43_11560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
ALW87330
UniProt:
A0A0U4C8P3
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All DBs
Position
complement(2823537..2824448)
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AA seq
303 aa
AA seq
DB search
MTFELKILGSASATPVLARHPTAQVLTVGANSYLIDCGEGTQWQMLEHRVRPHQLRAIFI
SHLHGDHYFGLFGLLGTMHLQGRTQPLQIIGPPGLDEVLTAQARVSNMQMGFTMEFIPVD
TEAHAVVYEDALITVASLPMRHRIPCAGYLFAEKPRRANLLKDKLPAGLRPEQLARLAQG
EDLAADEHQPGLRHADVAGRPPTPRRYAFFSDTLYTPALADLIRGADLLYHEATFLEDLK
ERAAQTHHSTARQAAQLAHDAGVKHLLLGHFSSRYKALEPLLHEAQPVFPTAQLATEGLV
VSL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
ttgacttttgagctgaagattttgggctccgcctccgctacgccggtcctggcccgccac
cccacggcgcaggtgctcacggtgggcgcgaatagctacctgattgattgcggcgagggc
acccagtggcagatgctggagcaccgcgtgcggccccatcagctgcgggctattttcatt
tcgcacctccacggcgaccattacttcgggctatttggcttgctgggcaccatgcacctg
cagggccggacccagccgctgcaaatcatcggcccgcccggcctcgacgaggtgctcacc
gcgcaggctcgggtttccaacatgcagatgggcttcacgatggagtttatccccgtggat
accgaggcgcatgccgtggtgtacgaagacgcgcttatcaccgtggcgtcgctgcccatg
cgccaccgtattccatgcgccggctacctttttgccgagaagccccgccgcgccaacctg
ctgaaggacaagctgcctgccgggctccgccccgagcaactagcgcgcctggcgcagggc
gaagacctggccgccgatgagcaccagccaggcctgcgccacgccgacgtagccggccgc
ccgcccaccccgcgccgctacgcgttcttctccgacacgctgtacacgcccgccctcgcc
gacctcatccgcggggccgacctgctctaccacgaagccacctttctggaagacctgaag
gagcgcgccgcccaaacccaccacagcaccgcccgacaggccgcgcagctcgcccacgat
gccggggtgaaacacctgctgctgggccatttctcgagtcgctacaaagccctggagccg
ctgctgcacgaggcgcagccggtgttccccaccgcccagctggccaccgagggcctggtg
gtttctctttaa
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