Hymenobacter sedentarius: AUC43_13175
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Entry
AUC43_13175 CDS
T04242
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hyg
Hymenobacter sedentarius
Brite
KEGG Orthology (KO) [BR:
hyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyg03032
]
AUC43_13175
03400 DNA repair and recombination proteins [BR:
hyg03400
]
AUC43_13175
Enzymes [BR:
hyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AUC43_13175
DNA replication proteins [BR:
hyg03032
]
Prokaryotic type
DNA Topoisomerases
AUC43_13175
DNA repair and recombination proteins [BR:
hyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AUC43_13175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HcgF
Motif
Other DBs
NCBI-ProteinID:
ALW85961
UniProt:
A0A0U4CCP0
LinkDB
All DBs
Position
complement(3210200..3212686)
Genome browser
AA seq
828 aa
AA seq
DB search
MVKNLVIVESPAKAKTIEGYLGQDFVVRSSYGHVRDLPKDNNAIDIANGFKPTYVVSADK
RELIAQLKKLSKEAEMVWLASDDDREGEAISWHLAETLNLPIAKTKRIVFREITKNAILG
AIANPREVDQNLVNAQQARRVLDRLVGFELSPVLWKKVKPGLSAGRVQSVAVRLVVERER
EVSHFLSASAYRIVARFDAGRGAVLEAELPTRYKVREEAEAFLQRCLGATYQIESLDKKP
GKRSPAAPFTTSTLQQEASRKLGFSVAQTMSVAQKLYEAGKISYMRTDSVNLSGEALAGA
QAAITAAYGAEYHHTRTFKTKSASAQEAHEAIRPTDFGAVKAGSDASEQRLYDLIRKRAM
ASQMAEAVIERTTAVIGISTQPGVTFTATGEVITFEGFLKVYAESKDDDDEEEAKDGESS
FSRGLPPLSIGQNLPLQRLSATERFSAPPARYTEASLVKKLEEMGIGRPSTYAPTISTVQ
KRGYVEKDTREGKERAFHVLTLEGNGVNTEIKTENYGAEKAKLFPTDTAMVVNDFLVEHF
PVIVDYQFTAKVEDEFDQIANGHENWTQMLTGFYGKFHATIEAGQDIERSTLGSTREIGV
HPETGEKITARLGRYGPYVALGDTTDPEVKPAYANLRKGQFIESITLDEALDLFKLPRVV
GEFEGKDMTANLGRFGPYIRHDSKFYSLTKEQDPHTITAEEGVALIENKRKTDAERLIKS
FPENPDIQVLNGRFGPYIVAGKKNVKIPKGEEPTELTLARCQELADATPDKPAKGGRFGK
KAAPAAKEEKADTPAKKKPAAKKPAAKKKPAAKAAAKPAAKKAPAKAK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagaatttagttatcgtcgaatcgccggccaaggccaaaaccattgaaggctat
ctgggccaggatttcgtggtgcgctccagctacgggcacgtccgcgacctgcctaaagac
aataatgccattgatatagccaatggttttaagcctacttacgtggtatcggccgacaaa
cgggagctaattgcccagctaaaaaaactttccaaggaggccgaaatggtttggttggcg
agtgacgatgaccgcgaaggcgaagccatcagctggcacctggccgaaaccctgaacttg
ccgattgcgaagaccaagcgcattgtcttccgcgaaatcaccaaaaacgccattctgggc
gccatcgccaacccgcgcgaagttgaccagaacctggtgaatgcccagcaggcccgccgc
gtgctcgaccggctggtgggctttgagctgagccccgtgctctggaaaaaagtaaagccg
ggcctttcggccggtcgggtacagtcggtagctgtgcgccttgtagtggagcgggagcgc
gaagtttcccatttcctgtcggccagcgcctaccgcattgtggcccgcttcgatgccggc
cgcggcgcagtactcgaagccgagctgccgacccgctataaggtgcgggaagaagccgag
gccttcctgcagcgttgcctgggcgctacctatcagattgagagcctcgacaagaagccc
ggcaagcgcagcccggccgcgccgttcaccacgtctacgctgcagcaggaggcctcgcgc
aagctgggcttctcggtggcccagaccatgagcgtggcccaaaagctctacgaagctggt
aaaatcagctacatgcggacggactcggtgaacctctcgggcgaggccttggcgggcgcg
caggcggccattacggcggcttacggcgcggaataccaccacacccgcacgttcaaaacc
aagtcagcttcggcccaggaggcgcacgaagccatccggcccaccgattttggcgccgtg
aaagcgggttctgatgcgtcggagcagcgcttgtacgacctgattcgcaagcgggccatg
gcctcgcaaatggcggaagccgtgattgagcgtaccacggcggttattggcatcagcacg
cagccgggcgtcacgttcacggccaccggcgaggtcatcaccttcgagggcttcctgaaa
gtgtatgccgagagcaaggacgacgatgacgaggaagaagcgaaagacggagaatcgagc
ttttcgcgcggtttgccgcccttgagcattgggcagaacctgccgttgcagcgcctgagt
gctaccgagcggttttcggcgcccccggcgcgctacaccgaagcctcgctggtgaagaag
ctggaagaaatgggcattggccggccttccacctacgcccctaccatcagcaccgtgcag
aagcggggctacgtggaaaaggacacccgcgaaggcaaggagcgcgccttccacgtgctc
actctggaaggcaacggggtgaacaccgaaatcaaaaccgagaactacggcgccgaaaaa
gccaagctgtttcccactgatacggccatggtggtcaatgacttcctggtggagcacttt
cccgtgattgtggactaccagttcacagccaaggtggaagatgaatttgaccagattgcc
aacggccacgaaaactggacgcagatgctgaccggcttctacggcaagtttcacgcaacc
atcgaggccggccaggatattgagcgcagcaccctgggcagcacccgcgaaatcggcgtg
caccccgaaacgggcgagaaaatcacggcccgactgggccgctacggtccctacgtggcg
ctgggcgacaccaccgaccccgaggtgaaacccgcctacgccaacctgcgcaagggccag
ttcattgaaagcattactttggatgaggcgctggacctgttcaaactgccgcgcgtggtg
ggcgagtttgagggcaaggacatgacggccaacctgggccgctttggcccttacatccgc
cacgacagcaagttctattccctcaccaaggagcaggacccgcacaccatcacggccgag
gaaggcgtggcactgattgaaaacaagcgcaaaaccgacgccgagcgcctcatcaagtcg
ttccccgaaaaccctgacattcaggtgctgaatggccggtttgggccctacatcgtggcg
ggcaagaagaacgtgaagattcccaaaggcgaagagccgacggaactcacgctggcgcgt
tgccaggagctggccgacgccacccccgacaagcccgccaaaggcggacgctttggcaaa
aaggctgcccctgccgccaaggaggagaaagccgatacgcccgctaagaaaaaaccagcc
gccaaaaagcccgcggcaaagaagaagccagctgcaaaagccgctgccaagccggccgcc
aaaaaagccccggcaaaagcaaaatag
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