Hymenobacter sedentarius: AUC43_13225
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Entry
AUC43_13225 CDS
T04242
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hyg
Hymenobacter sedentarius
Pathway
hyg03420
Nucleotide excision repair
hyg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AUC43_13225
03430 Mismatch repair
AUC43_13225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyg03400
]
AUC43_13225
Enzymes [BR:
hyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AUC43_13225
DNA repair and recombination proteins [BR:
hyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AUC43_13225
MMR (mismatch excision repair)
Other MMR factors
AUC43_13225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
ResIII
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
ALW85967
UniProt:
A0A0U3K054
LinkDB
All DBs
Position
complement(3225001..3227247)
Genome browser
AA seq
748 aa
AA seq
DB search
MALDYLSLLNPSQAAAVMQTEGPCMIIAGAGSGKTRVLTYRIANLLEKGVDPFNILALTF
TNKAAKEMRARVEKVVGPAARNLWMGTFHSVFAKILRSEADKIGYPRSFTIYDTQDSKTL
IGQIVKELELDDKLYKPSLVLGRISAAKNKLISVNQYLNDAAIKADDEAALRPKIGVLYQ
QYQQRCFKAGAMDFDDLLFNTNVLFKEHVDVLNKYQNMFRFVMVDEYQDTNYSQYLITRK
LAAKERNICVVGDDAQSIYAFRGADITNILNFEKDYPELQVFKLEQNYRSTKNIVWAANS
VIKNNQAQLRKDVFSENEDGTLIEVLKAASDNEEGKLVANSIYEDKMNGHLSYDNFAILY
RTNAQSRAMEEALRKLNIRYKIVGGLSFYQRKEIKDLVAYLRLTVNQNDEQALRRVINYP
KRGIGDTTISKLITTADENNHSLWEVVANADQFMPARVSNPVVGFAEKIKSYMVVAAKED
AFEAAKFIAKNSGMLEELYADKSIEGLSRYENMQELLNGIKEYVDDPEREDKSLGAFLQD
IALVTDSDLKDAAQEGEAVTLMTIHSAKGLEFRNVYIVGMEENLFPSQMMITSRADLEEE
RRLFYVAITRAEKKLTLSYATSRYQWGNLRSCEKSRFLDEIDPQYVNFKFAAGPGAGESP
FQHVFERRSNLIPTAPRKVQATKYVAPADFTPSDTSKLQSGQRVEHAKFGFGVVSQLETQ
QGTTKATIQFEEVGEKVLLLSFAKLRVH
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggcactagattatttatccctcctcaatccgtcgcaggccgccgcggtgatgcaaacc
gaaggcccgtgcatgattatcgccggtgccggctcgggcaaaacccgggtgcttacctac
cgcattgccaacctactggaaaagggcgtcgacccgttcaacatcctcgccctcaccttt
accaacaaggccgccaaggagatgcgcgcccgcgtggagaaagtcgttggccccgccgcc
cgcaacctctggatgggcaccttccactcggtgttcgccaaaatcctccgttccgaagcc
gacaagattggttacccacgcagcttcaccatctacgacacccaggactcgaagactcta
attgggcagattgtgaaagagctggagctcgacgacaagctctacaagcccagcctggtg
ttgggccgcatctcggccgccaagaacaagctgatttcggtaaaccagtaccttaacgac
gcggccatcaaggccgacgacgaggcggcactccggcccaaaatcggcgtgctctatcag
cagtaccagcagcgctgcttcaaggcaggcgccatggacttcgacgacctgcttttcaac
accaacgtgctgttcaaagaacacgtcgacgtgctgaacaagtaccagaacatgttccgg
ttcgtgatggtagacgagtatcaggacaccaactattcgcagtatctgattacccgcaag
ctggcggcgaaagagaggaacatctgcgtagtgggcgacgacgcgcaaagcatctacgcc
ttccgcggcgccgacatcaccaacatcctcaacttcgagaaagactaccccgagctgcag
gtttttaagctggagcagaactaccgttccaccaagaacatcgtgtgggccgcgaactcg
gtgattaaaaacaaccaggcgcagctgcgcaaggacgttttctcggagaacgaagacggc
accctgattgaagtcctgaaagccgcttccgacaacgaggaaggcaagttggtggccaat
tccatctacgaggacaagatgaacggccatttgtcctacgacaacttcgccatcctgtac
cgcaccaacgcgcaaagccgcgcgatggaagaagccctgcggaagctcaacatccggtac
aaaattgttggcggcctgtcgttttatcagcgcaaggaaatcaaggacttggtggcctat
ctgcgcctcacagttaaccaaaacgacgagcaggcgttgcgccgggtgattaactacccc
aagcgcggcatcggcgatactacaatcagcaaactcatcaccacggccgacgaaaacaac
cactcactgtgggaagtagtagccaacgccgaccagtttatgccggcgcgggtgtcgaat
ccggtggtgggctttgccgagaaaatcaaaagctacatggtggtagcggccaaggaagat
gcctttgaagcggccaaattcatcgccaaaaactcgggcatgctcgaggaactgtacgcc
gataagagcatagagggcctctcccgctacgaaaacatgcaggagctgctcaacggtatc
aaggaatacgtcgacgaccccgagcgcgaagacaagagcctcggcgccttcctgcaggac
attgctctggtgacggactccgacctgaaagacgcagcgcaggaaggcgaagccgtgacg
ctgatgaccattcactcggcaaagggtctggaattccgcaatgtgtacatcgtgggcatg
gaggaaaatctcttcccgagccagatgatgattacctcgcgggctgacctggaggaagag
cgccgcctgttttacgtagccatcacgcgggccgagaagaagctcacgttgagctacgcc
acttcgcgctaccagtggggcaacttgcgcagctgcgaaaaaagccgctttctggatgag
attgacccgcagtacgtcaacttcaaattcgcggccgggccgggcgcgggcgagtcgccg
tttcagcacgtatttgagcgccgctcgaacctaattccaacggcgccgcgtaaggtgcaa
gccaccaaatacgtggccccggccgacttcactccttccgacacctccaagctgcaaagc
gggcagcgcgtcgagcacgccaagttcggcttcggcgtagtgagccagctcgaaacgcag
cagggtaccaccaaagccaccattcagttcgaagaagtaggtgagaaagtgctattgctc
agcttcgccaagctgcgggtgcactaa
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