Hymenobacter sedentarius: AUC43_14075
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Entry
AUC43_14075 CDS
T04242
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hyg
Hymenobacter sedentarius
Brite
KEGG Orthology (KO) [BR:
hyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyg03032
]
AUC43_14075
03400 DNA repair and recombination proteins [BR:
hyg03400
]
AUC43_14075
Enzymes [BR:
hyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AUC43_14075
DNA replication proteins [BR:
hyg03032
]
Prokaryotic type
DNA Topoisomerases
AUC43_14075
DNA repair and recombination proteins [BR:
hyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AUC43_14075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ALW86121
UniProt:
A0A0U4CD21
LinkDB
All DBs
Position
3418957..3420066
Genome browser
AA seq
369 aa
AA seq
DB search
MPTAAAPRSKTRKKVLVPQDEAHIVYKDPARQAQMAGLRYATDQAAGISRKATRAGNFTY
HDAQGHKITDPKTLERIASFVIPPAWTDVWIAASPTAHLQVTGRDSLGRKQYRYHPAWDE
MRSLTKFSRLRTFGEQLAPLREQLNKDLRRPTLDREKVVALVLTLMDQSFIRVGNKEYAK
KNNSYGLTTLRDKHVAIEGADVNFSFVGKKGVPHDVTVHDVRLARLVRKCKEIPGQHLFQ
YYSADGQRHALESGDVNEYLHRHTGLALSAKDFRTWGGTVKMVECLEGVLREEPELAPEN
VIKRAVKEVATGLGNTPTVCSKYYIHPQVVELFKSGQLIEYLRQHDAEAAPGDLLSPMER
LVLKMLEQA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgccgccgctcctcgctctaaaacccgtaaaaaggtgcttgtgccccaagat
gaggcgcatatcgtgtataaagacccggcccgccaggcccagatggcgggcttgcgctat
gccaccgaccaggccgcgggcatcagccggaaagccacgcgggccggcaactttacgtac
cacgatgcccagggccacaaaataaccgaccctaaaaccctggagcgcattgccagcttc
gtgattccgccggcctggacggacgtgtggattgcggcctcgcccaccgcccacctgcag
gtgaccggccgcgacagcctggggcggaagcagtaccgctaccacccggcctgggacgaa
atgcgcagccttaccaagttttcgcgtctgcgcaccttcggcgaacaactggccccgctc
cgcgagcagctcaacaaagacctgcgccgccccacgctggaccgcgaaaaagtagtggcc
ctggtgctcacactaatggaccaatcgttcatccgcgtgggcaacaaggagtacgccaag
aagaacaacagctacggcctgaccaccctgcgcgacaagcacgtggcgatagaaggcgcc
gatgtcaacttcagcttcgtgggcaaaaagggcgtgccgcacgacgtgaccgtgcacgat
gtccggctagcccggctggtgcgcaagtgcaaggagattcccgggcagcacttgttccag
tattactcggccgatggccagcggcacgccctggaatcgggtgatgtgaacgagtacctg
caccggcacacgggcctggcgctgtcggccaaggatttccggacctggggcggcaccgtg
aaaatggtggagtgcctggaaggcgtactgcgcgaagagcccgagttagcccccgaaaac
gtgattaagcgagctgtgaaggaagtggccacgggcctgggcaatacccccacggtctgc
tccaaatactacattcacccgcaggtagtggagctgttcaagtcgggccaactcatcgaa
tacctgcgccagcacgacgccgaagcggcgcccggggatttgctttcgcccatggagcgg
ctggtactgaagatgctggagcaggcgtag
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