Hymenobacter sedentarius: AUC43_14650
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Entry
AUC43_14650 CDS
T04242
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hyg
Hymenobacter sedentarius
Pathway
hyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AUC43_14650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyg03019
]
AUC43_14650
03016 Transfer RNA biogenesis [BR:
hyg03016
]
AUC43_14650
Enzymes [BR:
hyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AUC43_14650
Messenger RNA biogenesis [BR:
hyg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AUC43_14650
Transfer RNA biogenesis [BR:
hyg03016
]
Prokaryotic type
tRNA degradation factors
AUC43_14650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
Motif
Other DBs
NCBI-ProteinID:
ALW86216
UniProt:
A0A0U4C7A6
LinkDB
All DBs
Position
complement(3558161..3560332)
Genome browser
AA seq
723 aa
AA seq
DB search
MSQPHAITKTLALPDGRVISIETGKLAKFADGAVVVRLGDTMLLATVVSAPSQREGVDFL
PLSVDYQEKFGSAGKIPGSFQRREGRLSDYEILVCRLVDRILRPMFPKDYHYEVQVMITL
ISADKEVQPDALAALAASAALSISDIPFAGPISEVRVARIDGQFQINPKTSDLARADMDL
MVGATADSVAMVEGAMKEVSEEEMVAAIAFGHEAIKAQCQLQKDLAEAVGREANSPTREY
PQYEENEDLKKHIHANIYQHAYAVARSGNTSKGGRKEGFSEVKKAFLEKLLAEQPELDMK
MFGRYYSAAEKKAIRDMMVKERVRLDGRQLTEIRPIWSEINYLPGAHGSAIFTRGETQSL
TTATLGTKLDEQIVDQPLTKGYSKFMLHYNFPGFSTGEVKPNRGAGRREIGHGNLALRSL
RQVLPPDDENPYTIRIVSDILESNGSSSMATVCAGSLALMDAGVKISAAVAGIAMGLVQD
KETGEYAVLSDILGDEDHLGDMDFKVTGTEKGICACQMDIKIQGLSNEILTAALHQAREG
RLHILREMAKTIAAPAAELKPHTPRSHKMLIDKEFIGAVIGPGGKVIQQIQKDTNATVII
EEKDEKGHVSIYASNQEDMQGAIDRIRAIAAQPEVGEVYKGKVRSIQPYGAFVEIMPGKD
GLLHISEVTHERIQTLEGLLEVGQDIDVKLVEIDKKTGKYRLSRKVLLPKPEAAAASNGE
AKA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaccccacgccattaccaaaaccttggcgctgcctgacggccgcgttatctcc
atcgaaaccggcaagctggccaaattcgccgacggcgccgttgtggttcgcctcggcgac
accatgctgctcgccacggtggtttcggccccgagccagcgcgaaggcgttgacttcctg
ccgctgtcggtagattaccaggagaaattcggctcggccggcaaaatccccggctcgttc
cagcgccgcgaaggccgcctgtcggactatgaaatcctggtctgccgcctcgttgaccgc
atcctgcggcccatgttccccaaggactaccactacgaagtgcaggtgatgattacgctc
atctctgccgacaaagaagtgcagcccgacgccctagccgctttggccgcttcggctgct
ttgtcgatttcggacattccgtttgctgggcccatttccgaagtgcgcgtggcgcgcatc
gacggccagttccagattaaccccaagacttccgacctggcccgggccgacatggacctc
atggtaggcgctacggccgactccgtggccatggtggaaggtgccatgaaggaagtgagc
gaagaagaaatggtggcagccattgccttcggccacgaagccatcaaggctcagtgccag
ctgcaaaaggacctggcggaagccgtgggacgtgaagccaactcacctacccgcgagtac
cctcagtacgaggagaacgaggacttgaagaagcacatccacgccaacatttaccagcac
gcttacgccgtggcccgctccggcaacaccagcaaaggtggccgcaaggaaggcttctcg
gaagtaaaaaaggcgtttttggaaaagctcttggctgagcagcctgagctggacatgaag
atgttcggccgctactacagcgcggctgagaagaaagccatccgcgacatgatggtgaaa
gagcgggtgcgcctcgacggccgccagctcaccgaaatccgccctatctggtcggaaatc
aactatttgcccggtgcccacggctcggcaatcttcacccgcggcgaaacccaaagcctg
accacggccacgctcggcaccaagctcgacgagcagattgtggaccagcccctcaccaag
ggctactcgaagtttatgctgcactacaacttccccggtttctcgaccggtgaggtgaag
cccaaccggggcgctggccgccgcgaaatcggccacggcaatttggccctgcgctcgctg
cgccaggtgctgccgcccgatgacgagaacccctacaccatccgcatcgtgtcggacatc
ctggagtcgaacggctctagctcgatggccacagtatgcgctggctcgctagcgctgatg
gacgccggcgtgaagatttcggctgctgtagccggtatcgccatgggtttggtacaggac
aaggaaaccggtgagtacgccgtactgagcgacattctcggcgacgaggaccaccttggc
gacatggacttcaaagtaaccggcaccgagaaaggcatttgcgcctgccagatggacatc
aaaatccagggcttgagcaatgagattctgaccgccgcgctgcaccaggcccgcgaaggc
cgcctgcacatcctgcgcgaaatggcgaagaccatcgcggcgccggctgctgagctgaaa
cctcacaccccgcgctcgcacaaaatgttgattgacaaagaattcattggcgcggtaatc
gggccaggtggcaaagtcattcagcaaatccagaaggataccaacgctacggttatcatc
gaggagaaggacgagaagggccacgtgagcatctacgcctccaaccaagaggacatgcag
ggcgccatcgaccgcatccgggccatcgcggcccagccggaagtgggcgaggtgtacaaa
ggcaaggtgcgcagcatccagccctacggtgccttcgtggaaatcatgccgggcaaagac
ggcttgctgcacatctccgaggtgacgcacgagcgcattcagaccttggaaggcttgttg
gaagtggggcaggatattgacgtgaaactggtggaaatcgataagaaaaccggcaagtac
cggctctcgcgcaaagtgctgttgcccaagcccgaagcggctgctgccagcaacggcgaa
gctaaagcatag
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