Hymenobacter sedentarius: AUC43_18245
Help
Entry
AUC43_18245 CDS
T04242
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
hyg
Hymenobacter sedentarius
Pathway
hyg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AUC43_18245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyg03400
]
AUC43_18245
DNA repair and recombination proteins [BR:
hyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AUC43_18245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Rad17
AAA_22
Dynamitin
ZYG-11_interact
UGSC
Motif
Other DBs
NCBI-ProteinID:
ALW86846
UniProt:
A0A0U4CTU3
LinkDB
All DBs
Position
complement(4485455..4487896)
Genome browser
AA seq
813 aa
AA seq
DB search
MLLPQNFEQKIGFTTLREQLEANCLSALGRQYVARMEFQTKHEPLLKLLQQADEFAYLLR
SGADFPASHYYDPQAHLKRAALPGAYLDVAAFFEVKMSLRTIRQALTFFTQADAGLYPTL
RLLGIGVQVDRNLLAAMDKVVDDEGQVRDDASPLLRQIQQELIARQGQLRKQIAGILRHA
KSEGWIPGDAEPTIRGGRLVLPVIAEHKRRVKGLIHDESASGQTVYIEPAEVFELNNDIK
DLDNAYHRELIRILTALTDQLRPHIPDLRKAYSYLGLIDFIRAKARLAVALNCRLPVMHS
KPLLKWHGVRHPLLQLAFAQHKRENGDPREVVPLDLELNHEQRILIISGPNAGGKSVALK
TVGLVQFMLQMGLLIPCADNSEAGVFEDIFLDIGDEQSLENDLSTYSSHLLAMKQFLLLA
GKKSLVLIDEFGTGTEPSLGGAIAEAVLDQLNQARVYGVITTHYTNLKNFAERTPHLVNG
AMRYDPEKLQPLYRLEVGKPGSSFAIEIARKIGLPKSVVERASQLVGKDKIRYDRLLEGL
EKEKTELEARTAEATKQEKRLKRAAQEYTDLKQHLEDTRLETLRNAKQQAKALLQNTNQQ
IEATIGEIRRGQADKEINKKAREKLDTFVRTELQIEPPKPKASRERAEAGDLQPGDKVAL
FGQEGHGELVSVKGKTAEVLFGGLKTLVKISQLEKLGRAEIREREQAAKAKKSKLSGGGS
GGNGVNITDRMAGFSPTLDLRGERAEDALTKTMSFVDDAVMLGMPEIKFLHGRGNGVLRQ
VVRDYLRSQRAVASVGDEHADRGGDGVTIAVLK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
ttgctgctaccccaaaacttcgaacaaaaaataggcttcaccacgctgcgcgagcagctc
gaagccaattgcctttccgccctgggccggcagtacgtggcccgcatggagttccaaacc
aagcacgagcccctgctgaagctgctgcagcaggccgatgagtttgcctacctgttgcgc
tccggcgccgattttcccgcctcgcactactacgacccccaggcccacctcaagcgcgcg
gccctgcccggcgcttacctcgacgtagcggccttctttgaggtgaaaatgagtttgcgg
accatccgccaggcgctcacgtttttcacccaggccgatgccggcctataccccacgctg
cgcctgctgggcataggcgtgcaagtagaccgcaacttgctggccgctatggacaaagtg
gtggacgacgagggccaagtgcgcgacgacgcctcgccgctgctgcgccagatccagcag
gagctgattgcgcgccagggccagctgcgcaagcagattgccggcatcctgcgccacgcc
aagagcgagggctggattccgggcgacgccgagcccaccattcgcggtgggcgcctggtg
ctgccggttattgccgagcacaagcgccgggtgaagggcttgattcacgacgagtcggcc
tccggccaaacggtgtacatcgagccggccgaggtattcgagctcaacaacgacatcaag
gacctcgacaacgcctaccaccgcgagctgattcgcatcctcacggccctgactgaccag
ctgcggccccacattccggacctgcgcaaggcctattcatacctgggcctgattgacttt
atccgggccaaagcccggctggccgtggccctgaattgccgcctgccggtgatgcacagc
aagccactgctgaagtggcacggcgtgcgccacccgctgctgcagctggcctttgcccag
cacaagcgcgaaaacggcgacccccgcgaagtagtgccgctggacctggagctgaaccac
gagcagcgcatcctgattatctcgggcccgaacgccggtggtaaatccgtggcgctgaaa
acggtggggttggtgcagttcatgctgcagatgggcctgctgattccgtgcgccgataat
tccgaagccggggtgttcgaggatattttcctggacatcggcgacgagcagagtctggaa
aatgacttgagtacctactcgtcgcacttgctggccatgaagcagtttttgctgctggcc
ggcaagaaaagcttggtgctgattgacgaattcggtaccggcaccgagcccagcctgggc
ggcgccattgccgaagccgtgctcgaccagctcaaccaggcccgggtgtacggcgtcatc
accacgcactacaccaacctgaagaacttcgccgagcgcaccccgcacctcgtgaacggc
gccatgcgctacgaccccgagaagctgcagccgctctaccgcctcgaggtgggcaagccg
ggctcctcgtttgccatcgaaattgcccgaaaaattgggctgcccaagagcgtggtagag
cgcgcgtcgcagctggtgggcaaagacaaaatccgctacgaccgcctgctcgaaggcctc
gaaaaagagaaaaccgaactggaagcccgcaccgccgaagccaccaagcaggaaaagcgc
ctcaagcgcgccgctcaggaatacaccgacctcaagcagcacctcgaagacacgcgcctc
gaaaccctgcgcaacgccaagcaacaagccaaagcgctgctgcagaataccaaccagcag
atagaggccactattggcgaaatccggcgcggccaggccgataaggaaatcaacaaaaag
gcccgcgagaagctggatacgttcgtgcggactgagctgcagattgagccgcccaagccc
aaagccagccgcgagcgcgccgaagccggcgacctccagcccggcgacaaagtggccctg
ttcggccaggaagggcacggcgaactggtcagtgtgaaaggcaaaaccgccgaagtcctc
ttcggtgggctgaaaacgctggtgaaaatcagccagcttgagaagctgggccgcgccgaa
atccgcgagcgggagcaagcggccaaagccaagaaatcgaagctcagcggcggtggctcc
ggcggcaacggcgtgaacatcaccgaccgcatggccggattcagcccaacgctggacctg
cgcggcgagcgcgccgaagacgccctcaccaaaaccatgagcttcgtggacgacgccgtg
atgcttggtatgcccgaaatcaagttcctgcacggccgcggcaacggtgtgctccggcaa
gtggtgcgcgactacctgcgctcgcagcgcgccgtagccagcgtgggcgacgagcacgcc
gacaggggcggggatggcgtgaccatagcggtgctgaagtaa
DBGET
integrated database retrieval system
