Hymenobacter sedentarius: AUC43_18910
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Entry
AUC43_18910 CDS
T04242
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hyg
Hymenobacter sedentarius
Pathway
hyg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AUC43_18910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyg03400
]
AUC43_18910
Enzymes [BR:
hyg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AUC43_18910
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AUC43_18910
DNA repair and recombination proteins [BR:
hyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AUC43_18910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ALW86966
UniProt:
A0A0U3SLD1
LinkDB
All DBs
Position
complement(4637879..4638712)
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AA seq
277 aa
AA seq
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MPELPEVETYRRFIDELAVGQTITALQVNDAHVLATPEDQLRAGLVGRTITGTSRLGKNC
FLELDNGKVLVLHFGMTGDVGAYRDEPDAPRFTRVALHLEDSGLRLAFIDPRKFGRIRLA
DSAAAHQKAKKIGPDALDITAIELHQKLARRKTLLKPLLLDQSITAGLGNWIVDEVLFQA
KIHPERIGATLTEKEGRALHAAVQLVLTTAINQEANYRHFPASFLIHAREWDTSATPSSD
DAHTFCPRHPKVKIDKYYVGGRATYTCAKCQPKPAAA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaattacccgaagtcgaaacctatcgccgctttattgacgaactggccgtgggc
caaaccattaccgccctgcaggtgaacgatgcgcacgtgctggccacgcctgaggaccaa
ctccgggccggcctcgtgggccgtactattacgggcacaagccgcttgggcaaaaactgc
tttctggagctggacaacggcaaagtgctggtgctgcactttggcatgaccggcgacgtg
ggcgcctaccgcgacgagcccgacgccccgcgcttcacccgcgtggcgctgcacctcgaa
gactctggcctgcgcctggcttttatcgacccgcgcaaatttggccgcatccgcctagcc
gatagtgccgccgcgcatcaaaaagctaagaagataggccccgatgcgctcgacatcacc
gccattgagctgcaccagaaacttgcccgtcgcaaaaccctgctcaagcccctgctgctc
gaccaaagcatcacggccggcctcggcaactggattgtggacgaagtgctgttccaggcc
aaaatccaccccgagcgcattggcgctacgcttaccgaaaaggagggccgggccctgcac
gccgccgtgcagctggtgctcaccacggccatcaaccaagaggccaattatcggcatttc
ccggcctcatttctcatccacgcccgggagtgggacaccagcgccacgcccagcagcgac
gatgcgcacaccttctgcccgcgccaccccaaggtgaagattgataagtactacgtgggc
ggccgggccacctacacctgcgcgaagtgccagcccaagccagcggctgcgtga
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