KEGG   Hymenobacter oligotrophus: D3Y59_02665
Entry
D3Y59_02665       CDS       T05656                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
hyh  Hymenobacter oligotrophus
Pathway
hyh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hyh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    D3Y59_02665 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hyh03400]
    D3Y59_02665 (uvrA)
DNA repair and recombination proteins [BR:hyh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     D3Y59_02665 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      D3Y59_02665 (uvrA)
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 AAA_29 DnaJ_CXXCXGXG SMC_N AAA_16 nSTAND1 DUF4350 RsgA_GTPase YmcF-like SLFN-g3_helicase Viral_helicase1 cobW
Other DBs
NCBI-ProteinID: AYA36055
UniProt: A0A3B7QWY5
LinkDB
Position
648966..651533
AA seq 855 aa
MAKQTPSASATPDFSGFVHVRGAREHNLKNVDLEIPRDALVVFTGVSGSGKSSLAFGTLY
AEAQRRYLESVSPYARRLFHQMAVPEVDSIDGLPPAVALQQQRGTPTTRSSVGSVTTLSN
LLRMLYSRAGDYPAGQGIIYAEAFSSNTPEGACPTCHGLGRIYEVTEQSMVPDPTLTIRE
RAIAAWPQAWGGQNQRDILVTLGYDVDIPWQELPQAQRDWILFTEEQPVVPVYPGYTPQE
TQRALKRKEPPNYMGTFTSARRHVLHTFANTQSPLMKKRALQYMLSTECPLCHGKRLRPE
SLSVTFAGLDIAEMAALPLKRVAALLLPFAEGTAKGRKRHDAEHPEQAIVAQRIAHDLVA
RLRVLLDLGLGYLSLERSTPTLSPGELQRLRLATQLYSNLFGVVYVLDEPSAGLHPSDTE
ALLKALHSLKQAGNSLFVVEHNLDVIRQADWLVDVGPAAGEKGGEILYSGAPAGLGKVAA
SQTRRYLFAASEAGAPRMPRTPGGWLKLAGITRNNLNNLEVAFPLGVMTTVTGVSGSGKS
SLVSQVLVELVGAELGMSNEQLSMNNDEEEVDIAHSSLIIDHSAPEGRIVSGLEHIKRLV
RVDQKPIGRTPRSNMATYTGLFDHVRKLFAATPAARKRRYDAGRFSFNVAKGRCENCQGE
GFVMVELLFLPSVYAPCPVCHGARYNAKTLEITYRDKNIAEVLGLTVDAAWEFFDEEPAV
HRALTVLREVGLGYLRLGQPATELSGGEAQRIKLATELQRQGRGNTLYVLDEPTTGLHPS
DVEKLLVQLDGLVDAGNTVVVVEHDMRVVASSDWVIDMGPGAGDEGGHVVAAGPPAEVAR
HKQSRTAPYLARFRR
NT seq 2568 nt   +upstreamnt  +downstreamnt
atggcaaaacaaactccttcggcttcggcaactcccgatttcagcggcttcgtgcacgtg
cgcggcgcccgcgagcacaacctcaaaaacgtcgacctcgagattccgcgcgatgcgctg
gtggtgttcaccggggtgtcgggctcgggcaaatcgtcgttggcattcggcactttgtac
gccgaagcccagcgccggtacctcgagtcggtgtcgccgtacgcgcggcggctgttccat
caaatggccgtgcccgaggtcgatagcatcgacgggctgccgccggccgtggccctgcag
caacagcgcggcacgcccaccacgcgctcctcggtaggttcggttactacactttctaac
ttgctgcgcatgctctactcgcgcgccggcgactaccccgcgggccagggcatcatctac
gccgaagcgttttcctcgaacacgcccgagggtgcctgccccacctgccacggcctgggg
cgcatctacgaagtaaccgagcaaagcatggtgcccgaccccacgcttaccatccgggag
cgggccattgccgcgtggccgcaggcctggggtgggcaaaaccagcgcgacatcctcgtg
accctaggttacgatgtcgacattccgtggcaggagctgccgcaagcccagcgcgactgg
attctgttcacggaggagcagcccgtggtgcccgtgtaccccggctacacgccccaggaa
acccaacgcgcccttaagcgcaaggagccgcccaattacatgggtacgtttaccagcgcc
cggcgccacgtgctgcacacctttgccaacacccaaagcccgctgatgaaaaaacgggct
ttgcagtacatgctcagcaccgagtgccccttgtgccacggcaagcgcctgcggcccgag
tcgttgtcggttacgtttgccgggctcgatattgccgagatggccgctttgccactgaag
cgcgtggctgccttgctgctgccttttgccgagggcaccgccaaaggccgcaagcgccac
gatgccgaacaccccgaacaagctattgtggcccaacgcattgcccacgacctggtcgcc
cgcctgcgcgtgctcctcgacctagggctgggctacctctccctggagcgcagcacgccc
acgttgtcgccgggcgagctgcagcgcttgcggctggctacgcagttgtactccaacctg
ttcggcgtggtgtacgtgctcgatgagccctcggcgggcctgcacccctccgataccgaa
gcgctgctgaaagccctgcacagcctcaagcaagccggcaattcgttgtttgtggtagag
cacaacctcgacgtgattcggcaggccgattggctggttgacgtaggccccgccgccggc
gaaaaaggcggcgaaatactctacagcggcgcacccgcgggcctaggaaaagtagccgcg
tcgcagacgcggcgctacctgtttgcggcttccgaagccggcgcacctaggatgccacgc
acccccggcggctggctaaagctggccggcatcacgcgtaacaacctgaataacctagag
gtggcgtttccgctgggcgtgatgacgaccgttacgggcgtgtcgggttcgggcaaatcg
agcctggtaagccaggtgctggtggagctggtgggcgcggagctgggaatgagcaatgaa
caattatcaatgaacaatgacgaagaagaagtcgacattgctcattcctcattgatcatt
gatcattcagcccccgaaggccgcatcgtcagcgggctcgagcacatcaagcgcctggtg
cgagttgatcagaaacccattggccgcacgccgcgctccaacatggctacctacaccggc
ctgttcgaccacgtgcgcaagctgtttgcggccacgcccgctgcccgcaagcgccgctac
gatgccgggcgattctccttcaacgttgccaagggccgctgcgaaaactgccagggcgag
gggtttgtgatggtggagctgctgtttctgcccagcgtatacgccccgtgccccgtgtgc
cacggtgcccgctacaacgccaaaaccctcgaaataacttaccgcgacaaaaacatagcc
gaggtgctgggcctgacggtagatgccgcctgggagtttttcgacgaggagcccgccgtg
caccgcgcgcttaccgtgctgcgcgaagtaggcttggggtacctgcgcctggggcagccg
gccaccgagctttcgggtggcgaggcgcagcgcattaagctggccacggagctgcagcgc
caaggccgcggcaataccctgtacgtgctcgatgagcccaccaccggcctgcacccctct
gatgtggagaagctgctggtgcagctcgatggcctggtagacgccggcaacaccgtggtg
gtggtggagcacgacatgcgcgtggtggccagcagcgactgggttatcgacatgggcccc
ggcgccggcgacgaaggcgggcacgtagtggccgccggcccgcccgccgaggtagcccgg
cacaagcaaagccgcaccgcgccctacctggcgcgcttccgccgctaa

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