Hymenobacter oligotrophus: D3Y59_03275
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Entry
D3Y59_03275 CDS
T05656
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
hyh
Hymenobacter oligotrophus
Pathway
hyh00541
Biosynthesis of various nucleotide sugars
hyh01100
Metabolic pathways
hyh01250
Biosynthesis of nucleotide sugars
Module
hyh_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
D3Y59_03275 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hyh01005
]
D3Y59_03275 (kdsB)
Enzymes [BR:
hyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
D3Y59_03275 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
hyh01005
]
Lipid A
D3Y59_03275 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AYA36168
UniProt:
A0A3B7QT34
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Position
complement(786356..787117)
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AA seq
253 aa
AA seq
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MHSIGIIPARYASTRLPGKPLIDLGGKSMIQRVVEQARQANLSRVVVATDDERIRKHVLG
FGGEAVLTNPDHPSGTDRVWEAYQHLGTPADCVVNIQGDEPFVHAAQINALLALFADANT
QIATLVKPVLNLEELLSPHLPKVVLGAQAEALYFSRHPVPYLRQHPQEQWLQHHPYLRHI
GLYAYRPAVLQQLTQLAPAPLELAESLEQLRWLTHGFRIRTAETALETIGIDTPEDVARA
LAYLQRPGQYPST
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcatcggcattatcccggcccgatacgcctctacccgcctgcccggcaaacct
ctcatcgacctaggcggcaaatcgatgatacagcgcgtggtggagcaggcccggcaagcc
aacctcagccgcgtggtagtggccaccgacgacgagcgcatccggaagcacgtgctgggt
tttggcggcgaggccgtgctaaccaaccccgaccaccccagcggcaccgaccgcgtgtgg
gaggcctaccagcacctaggcaccccggccgattgcgtggtaaacattcagggcgacgag
ccgtttgtgcacgccgcgcaaatcaacgccctgcttgccctttttgccgatgctaacacg
caaatcgccacgctcgtaaagcccgtgctcaacctcgaagagttgcttagcccgcacctg
cccaaggtagtgctcggggcccaggccgaggcgctgtacttcagccggcaccctgttcct
tacctgcgccagcacccgcaggagcagtggctgcagcaccacccttacctgcggcacatt
ggcttgtacgcctaccgcccggccgtgctgcagcagcttacgcagctggcgccggccccg
ctcgagctggccgagtcgctggagcaactgcgctggctaacacacggttttcgcatccgg
acggccgaaaccgccctcgaaaccatcggtatcgatacccccgaagacgttgctcgggcg
cttgcttacctgcagcggcccggccagtacccaagcacctag
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