Hymenobacter oligotrophus: D3Y59_03655
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Entry
D3Y59_03655 CDS
T05656
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
hyh
Hymenobacter oligotrophus
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hyh01002
]
D3Y59_03655
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyh01011
]
D3Y59_03655
Peptidases and inhibitors [BR:
hyh01002
]
Cysteine peptidases
Family C82
D3Y59_03655
Peptidoglycan biosynthesis and degradation proteins [BR:
hyh01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
D3Y59_03655
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AYA36239
UniProt:
A0A3B7R4R0
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Position
872595..874379
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AA seq
594 aa
AA seq
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MKSSVQTVFLSTLRLMLAFCLLLVTASCSQEQKAKVQDAAADLLPGAAKKAGPQPRVDTV
YVEKYMVTKPAFKGEIEWGKKFYKEREGRLGWFREHEVLPHAERMLSVLSKAGEEGLDPK
DYKVVDFDKLFAQLKEAPDTTARNALEKEIDVALSATYFNWADDFYRGLVNPREVKSIDW
KIKRNKIKLHKALMTILQERESTYPYYEFEPLHPEYDRLREALARYRAMQRSGGWATVPA
VKRLRPGDTSAVVPALRRRLLGFRPDGTPNPALAAQPQAVPVSNKAGQTNTAGSRESRSY
DAELVAAVKAFQEQNGLNPDGNLGPETLKLLNIPLQQRIDQIILNMERWRWIPKRFEPNY
LLVNIPDYHMWVYENGKPALDMRVIVGKQLNATPVFSDKMEYVVLAPYWNVPFSIIDKEL
RNGLENDPAGYLERLDMEVVKGSGEKATRVDPTSIDWANLTEANWKYTLRKRPGPRNDLG
DVKFLFPNSNDIYLHDTPHDELFSQAKRGFSHGCVRVERPLELAEYLLRNKPGWDMSKIQ
ETVAGGKEQYVTLPEKLPVYLVYFTTWVDDAGNVHFREDIYGHDKSLAQEYFST
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcctcggttcaaaccgtttttctctccactttacggctgatgctggctttctgc
ctgctgctggttactgcctcgtgcagccaggagcaaaaggcgaaagtgcaggatgcagcc
gctgatctgctgccgggcgctgccaaaaaagcgggcccgcagccgcgcgtcgacaccgtg
tacgttgagaagtacatggtcacgaagccggccttcaaaggcgaaattgaatggggtaaa
aagttttacaaagagcgcgaagggcgcctcggctggtttcgcgagcacgaggtactgccc
cacgccgagcgcatgttgtcggtgctgagcaaggccggcgaagagggcctcgaccccaaa
gactacaaagtcgtggatttcgataagctctttgcccagctgaaagaggcccccgacacc
accgcgcgcaacgccctcgaaaaagagatagacgttgcattatcagccacttacttcaac
tgggccgacgatttttaccgcggcctggtaaacccgcgcgaggtcaaaagcatcgactgg
aagatcaagcgcaacaaaatcaagttgcacaaggcgctcatgacgattttgcaagagcgc
gaaagcacttacccgtactacgagtttgagccgctgcaccccgagtacgaccggttgcgc
gaggcactggcgcgttaccgagccatgcagcgcagcggcggatgggccacggtgcccgcc
gtaaaacgcctgcgccccggcgacacctcggccgtggtgccggccttgcgccgccgcttg
ctgggcttccggcccgacggtacccccaatcccgcgctggcggcccagccgcaagcagtg
ccggtatccaacaaagccggccaaaccaacacggccggctcgcgcgagtcgcgcagctac
gacgccgagttggtggctgccgtaaaggcgtttcaggagcagaacggcctgaaccccgac
ggcaacctagggcccgaaaccctcaagctgctcaacattccgttgcagcaacgcatcgat
cagatcatcctgaacatggagcgctggcgctggataccgaagcgcttcgagcccaactac
ctgctcgtaaacatccccgactaccacatgtgggtgtacgagaacggcaagcccgccctc
gacatgcgcgtgattgtgggcaagcaactgaacgcaacccccgtattcagcgacaagatg
gaatacgtggtgctcgcgccgtactggaacgtgccgtttagcattattgataaggagctg
cgcaacgggttagaaaacgaccccgccggctacctcgagcgcctcgacatggaagtggtg
aaaggctccggcgaaaaagctactcgcgtcgaccccaccagcatcgattgggccaacctg
accgaagctaactggaagtacacgctgcgcaaacgcccgggcccgcgcaacgacctaggc
gacgtgaagttcttgttcccgaactccaacgacatttacctgcacgatacaccccacgac
gagctcttcagccaagccaagcgcggctttagccacggctgcgtgcgggtggagcggccg
ctcgagttggccgaatacctgctgcgcaacaagcccggttgggacatgagcaaaatccag
gaaaccgtggccggagggaaggagcagtatgtaacgcttcccgagaagctgccggtgtac
ttggtatactttaccacgtgggttgacgatgccggcaacgtgcatttccgcgaagacatc
tacgggcacgacaaatcgttggcacaagaatatttcagcacctaa
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