Hymenobacter oligotrophus: D3Y59_04575
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Entry
D3Y59_04575 CDS
T05656
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
hyh
Hymenobacter oligotrophus
Pathway
hyh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D3Y59_04575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyh03021
]
D3Y59_04575
Transcription machinery [BR:
hyh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D3Y59_04575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
UPF0122
TcdB_N
Scm3
DUF3364
Motif
Other DBs
NCBI-ProteinID:
AYA36396
UniProt:
A0A3B7R9X8
LinkDB
All DBs
Position
complement(1089017..1089880)
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AA seq
287 aa
AA seq
DB search
MRQLKISKQITNRESQSLDKYLQEIGKVDLLTPDEEVTLAQRIKEGDQQALEKLTKANLR
FVVSVAKQYQNQGLSLGDLINEGNLGLIKAAKRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNRVGSLNKISKSFSELEQKFEREPSPEEIAEVLELTTSEVVDTLKISGRHV
SVDAPFVQGEENRLLDVLENEDEETPDSGLMTDSLRKEVQRALSTLTKREADVITLYFGL
NGEHSLTLEEIGEKFNLTRERVRQIKEKAIRRLRHTSRSKALKPYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacagttaaaaatcagcaagcagattaccaaccgcgaaagccaatcgctggataag
tacctccaggagattggtaaggtagatctgctcactcccgacgaggaggtaacgctggca
cagcgcattaaggaaggcgaccagcaggcgctggaaaagctcaccaaggccaacctccgc
ttcgtggtgtcggtggccaagcaataccagaaccaaggcctatcgttgggcgacctgatc
aacgaaggcaacctgggccttatcaaagctgcgaagcgcttcgacgaaacccgcggtttc
aaattcatttcgtacgctgtttggtggatccgtcagtccatcctgcaggctttggccgaa
cagtcgcgtattgttcgtttgcccttgaaccgggtaggttcgctgaacaaaatcagcaag
tcgttctcggagcttgagcagaagttcgagcgtgagccgtcgcccgaagaaattgccgaa
gtattagagctgactacctcggaagtggtagacacgctcaaaatttcgggtcgtcacgtg
tcggtggatgcgccgtttgtgcaaggtgaggaaaatcgcttgctcgacgtactcgaaaac
gaagacgaagaaacgcccgacagcggtctgatgaccgactcgttgcgcaaggaagtgcaa
cgcgccctgagcacgctcaccaagcgcgaagccgacgtaattacgctgtactttggcctg
aacggtgaacactcgctgactttggaagaaatcggcgagaagtttaacctgacccgcgag
cgggtacgccagatcaaggaaaaggccattcgccgcctgcgccacacctcgcgttcgaaa
gcgttgaagccttacctgggctaa
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