Hymenobacter oligotrophus: D3Y59_04580
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Entry
D3Y59_04580 CDS
T05656
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hyh
Hymenobacter oligotrophus
Pathway
hyh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D3Y59_04580 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyh03019
]
D3Y59_04580 (pnp)
03016 Transfer RNA biogenesis [BR:
hyh03016
]
D3Y59_04580 (pnp)
Enzymes [BR:
hyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D3Y59_04580 (pnp)
Messenger RNA biogenesis [BR:
hyh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D3Y59_04580 (pnp)
Transfer RNA biogenesis [BR:
hyh03016
]
Prokaryotic type
tRNA degradation factors
D3Y59_04580 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
KH_2
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AYA36397
UniProt:
A0A3B7RQD5
LinkDB
All DBs
Position
complement(1090020..1092272)
Genome browser
AA seq
750 aa
AA seq
DB search
MPPYNAVTKHITLPDGRQISIETGKLAKFADGAVVVRLGDAMLLATVVSQPSQREGVDFL
PLSVDYQEKFGGAGKIPGSFQRREGRLSDYEVLVSRLVDRILRPMFPKDYHYEVQVMISL
ISADKDVQPDALAALAASAALSVSDIPFAGPISEVRVARIDGQLQINPKTSDIERADIDL
IVGATIDSVAMVEGEMDEVSEEEMVEAIAFAHEAIKEQVRVQQELSAAVEKSHVKREYPK
YDENDELKQRITEAVYQKAYEVAKSGNTSKAGRKEGFGAIRKALVEELQAENPELDMKMF
GRYYGSAEKKAIRDMMIKERTRLDGRQLTEIRPIWSEVNYLPGAHGSALFTRGETQSLTS
VALGTKLDEQIVDSAMVSGYNKFMLHYNFPAFSTGEVKPNRGPGRREVGHGNLAMRSIKK
VLPSEEENPYTIRVVSDILESNGSSSMATVCASSMALMDAGIKLKAAVSGIAMGLVQDKE
TGEYAVLSDILGDEDHLGDMDFKVTGTEKGIVACQMDIKIQGLSNEILTKALHQAREGRL
HILGEMAKTISAPAEDMKPHTPRSTKILVDKEYIGAIIGPGGKVVQQIQKDTNATITIEE
KDEKGHVYIYTSNANDMAAAVSRIRGIAATPEVGETYDGTVRSIQAYGAFVEFMPGKDGL
LHISEVSYDRLPSLDGVLQVGQEVKVQLVEVDKKTGKFRLSMKSLLPKPEGYVEPSERPE
RSERPDRGPRPDRGPRPERGERSDRPQGNR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttacaacgcggttaccaaacacatcacgctgccggatggccggcagatttct
atcgaaaccggcaagctggccaaattcgccgacggtgctgtcgtggttcgcctcggcgac
gccatgctgctcgccacggtggtctcgcagccctcgcagcgcgaaggcgttgacttcctg
ccgctgtcggtggactaccaggagaaattcggcggtgccggcaaaatccctggttcgttc
cagcgccgcgaaggccgcctgtcggattacgaagtgctggtatcgcgcctcgtcgaccga
attctgcgcccgatgttccccaaggactatcactacgaggtgcaggtgatgatttcgttg
atttcggccgataaggacgtacagcccgatgcgttggccgctttggctgcctcggctgcg
ctatcggtatcggacattcccttcgccggccccatctcggaggttcgcgtagctcgcatc
gacggccaactgcaaatcaaccccaagacttcggacatcgagcgtgccgacatcgacctg
atcgtgggtgctaccatcgactcggtggccatggtagaaggcgaaatggacgaagtgagc
gaggaagaaatggttgaggccattgccttcgcccacgaggccattaaagagcaagttcgg
gtgcagcaggagctgagcgccgccgtggagaaatcccacgtgaagcgcgagtaccccaag
tacgacgaaaacgacgagctgaagcagcgcattacggaggctgtttaccagaaagcctac
gaagttgccaagtcgggcaacaccagcaaagccggccgcaaggaaggttttggggccatc
cgcaaggctttggtggaagagctgcaagccgaaaaccccgagctggacatgaaaatgttc
ggccgctactacggctcggccgagaagaaggccatccgcgacatgatgatcaaggagcgt
acgcgcctcgacggtcgtcagctgacggaaattcgcccgatctggagcgaggtaaactac
ttgcccggtgcgcacggttcggccctgtttacgcgcggcgaaacccagtcgcttacttcg
gtagccctaggtaccaagctcgacgagcagattgtggactcggccatggtgtcgggttac
aacaagtttatgctgcactacaacttcccggccttctcgaccggcgaagtgaagccgaac
cgcggccccggccgccgcgaggtaggccacggcaacctggccatgcgctcgatcaagaaa
gtgttgccttcggaagaagaaaacccctacaccatccgcgtggtgtcggacattctggag
tcgaacggctcgtcgtcgatggctacggtttgtgcctcgtcgatggccttgatggacgct
ggcattaagctgaaggccgccgtttcgggcattgctatgggcttggttcaggacaaggaa
accggcgagtacgcggtgctgtccgacatcctgggcgacgaagaccacctaggcgacatg
gacttcaaagttaccggtaccgaaaagggcatcgtggcttgccagatggacatcaaaatc
cagggcttgtcgaacgaaattctcaccaaggcgctgcaccaagcccgcgaaggccgcctg
cacatcctaggtgaaatggccaagaccatcagcgcgccggccgaagacatgaagccgcat
accccgcgttcgaccaagattttggttgacaaggagtacatcggtgccatcatcggcccg
ggtggcaaagtggtgcagcagatccagaaggataccaacgcgaccatcaccattgaggag
aaggacgagaaaggccacgtgtacatctacacctcgaacgccaacgacatggccgctgcg
gtaagccgcatccgcggcattgccgccacgcccgaggttggcgaaacctacgacggcacg
gtgcgttcgatccaagcgtacggcgcgtttgtggagtttatgcccggcaaagacggcctg
ctccacatttcggaagtaagctacgaccgcctgccctcgctcgacggcgtgctgcaggta
ggccaggaagtaaaagtgcagttggtggaggtcgacaagaagacgggcaaattccgcctg
tcgatgaagagcctactgcccaagccggaaggctatgtagagcccagcgaacggccggag
cgctcggagcgccccgatcgtggaccgcgccccgaccgggggccgcgtccggagcgtggt
gagcggtcggatcgtcctcagggcaaccgttaa
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