Hymenobacter oligotrophus: D3Y59_04670
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Entry
D3Y59_04670 CDS
T05656
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hyh
Hymenobacter oligotrophus
Pathway
hyh03030
DNA replication
hyh03430
Mismatch repair
hyh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D3Y59_04670
03430 Mismatch repair
D3Y59_04670
03440 Homologous recombination
D3Y59_04670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyh03032
]
D3Y59_04670
03400 DNA repair and recombination proteins [BR:
hyh03400
]
D3Y59_04670
Enzymes [BR:
hyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D3Y59_04670
DNA replication proteins [BR:
hyh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D3Y59_04670
DNA repair and recombination proteins [BR:
hyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D3Y59_04670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DUF7508
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AYA36411
UniProt:
A0A3B7R4C9
LinkDB
All DBs
Position
1113042..1114517
Genome browser
AA seq
491 aa
AA seq
DB search
MYAIIDLETTGGQPTQDRITEIAIFIHDGEQVVDSFSTLLNPGRPIPFYIQQLTGITDEM
VRDAPHFHQIAKKVVQMTEGCVFVAHNVRFDYSFLKKEFADLGYTYSRKTLCTVRLSRSL
IPGQPSYSLGKLCANIGIELNNRHRAFGDAEATAILFDRLLKISQVAEAPGYEAAAPADK
LAAVDASAPSGRPAKQPTARKVAAVQQAIRTALLPPLITPEKVASLPQEAGVYYFHDEHG
EVIYVGKSINIYKRIQQHFAVDYKSRKSLDFKNSIADITWELTGSELVALLHESWEIKRL
KPQYNRAQRRSVFPAGIYLRVDENGYKRLYYGRADARNSEIPIIALGNQFKAKGFLYHKV
AKYNLCQKMCDLYKTTGSCFDYQVHRCKGACVGLEPPDEYNARVDEAIESITYEHQTFVI
IGQGRRAGERSVVVVEHGRYLGFGYIDETFTARRFEAFKDVIKPQVDNKDVQQIIRQYMR
TKHKDKVKVFA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgccatcatcgacctagaaaccaccgggggtcagcccacgcaggaccgcatcacc
gaaattgccattttcatccacgatggcgagcaggtggtcgattcgtttagcaccctgctc
aaccccggccgccccatccccttctacattcagcagctcacgggcattaccgatgagatg
gtgcgcgacgcgccgcactttcatcagatagcgaagaaggtggtgcagatgacggaaggc
tgcgtgtttgtggcccacaacgtgcgcttcgactactctttcctgaaaaaagagtttgcc
gacctagggtatacctactcgcgcaaaaccctttgcacggtgcgcctcagccgctcgctg
atacccggccagcccagctacagcttgggcaagctgtgcgccaacattggcattgagctg
aacaaccgccaccgcgctttcggcgacgccgaggccacggccatcctgttcgaccggctg
cttaagataagccaggtagcggaggcgcccggctacgaggccgccgcccccgccgataaa
ctggccgccgtagatgcttcggccccgagtggccggccggccaagcaacccaccgcccgc
aaagtggcagccgtgcagcaggccattcgcacggcgctactgccgccgctcatcacgccc
gaaaaagtagcctcgctgccgcaggaagcgggcgtgtactacttccacgacgagcacggc
gaggtgatttacgtgggcaagagcattaatatttacaaacgcattcagcagcacttcgcc
gtcgattacaagtcgcgcaagtcgctggattttaagaactccattgccgacatcacttgg
gagctcacgggctcggagctggtggcattgctgcacgagtcgtgggaaattaagcgcttg
aaaccgcagtacaaccgtgcgcagcgccgctcggtgtttccggcgggcatttacttgcgc
gtggatgaaaacggctacaagcgcctgtactacggccgcgctgatgcacgcaacagcgaa
attcccattattgcgttaggaaaccagttcaaggccaagggctttctgtaccacaaggtg
gccaagtacaacctgtgccagaagatgtgcgacttgtacaaaaccaccggctcgtgcttc
gattaccaagtgcaccgctgcaaaggcgcctgcgtaggcctggagccgcccgacgagtac
aacgcgcgcgtcgacgaggccattgaaagcatcacctacgagcaccaaaccttcgtaatc
atcgggcaggggcgccgcgcgggcgaacggtcggtggtggtggtggagcacggccgctac
ctagggtttggctacatcgacgaaacgtttaccgcccggcggtttgaggcgttcaaagac
gttatcaagccccaggtcgataacaaagacgtgcagcagattatccggcagtacatgcgc
accaagcacaaagacaaggtgaaggtgttcgcctag
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