Hymenobacter oligotrophus: D3Y59_06000
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Entry
D3Y59_06000 CDS
T05656
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hyh
Hymenobacter oligotrophus
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyh03032
]
D3Y59_06000 (gyrB)
03400 DNA repair and recombination proteins [BR:
hyh03400
]
D3Y59_06000 (gyrB)
Enzymes [BR:
hyh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
D3Y59_06000 (gyrB)
DNA replication proteins [BR:
hyh03032
]
Prokaryotic type
DNA Topoisomerases
D3Y59_06000 (gyrB)
DNA repair and recombination proteins [BR:
hyh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D3Y59_06000 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
AYA36647
UniProt:
A0A3B7RR68
LinkDB
All DBs
Position
complement(1420158..1422140)
Genome browser
AA seq
660 aa
AA seq
DB search
MSEIQEKKAPAAYSADSIQVLEGLEAVRKRPAMYIGDIGIKGLHHLVWEVVDNSIDEALA
GYCDTIDVTINEDNSITVRDNGRGIPVDFHQKEGRSALEVVMTVLHAGGKFDKDTYKVSG
GLHGVGVSCVNALSNLLRVTVYKNGHVYQQEYERGAPLYPVKQIGDTDRNGTQVEFWPDD
SIFTETVYRYETIATRLRELSYLNKGIRINLLDLREKDENGVARGEQFFSEGGLSEFVQY
IDGERNVLMTRPIHVVSERGGTPVEVALQYNDSYQEHIFSYVNNINTIEGGTHVAGFRSA
LTRTLKAYADKSGMLAKAKVEVQGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVSGA
VNQVVGEILNQYLEENPKEAMVIVEKVILAAKARIAARKAREMVQRKTVLGSNSLPGKLA
DCSESDPAICELYLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEKAQEHHIYENQEIR
NMITALGVSFGVPADPENGIEKDDKALNISKLRYHKVIIMTDADVDGSHIRTLILTFFFR
YMRELVDKGYIYIALPPLYLVKKGKEERYCWTEVERQAAVEELAKGRPESVNVQRYKGLG
EMNAEQLWTTTMQPETRSLKQVTVESAAEADHLFSMLMGDEVAPRRDFIEKNAKYAKLDV
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaattcaagagaaaaaagcccccgccgcatactcggcagatagtattcaggta
ctggaagggcttgaagccgtgcgcaagcgcccggccatgtacatcggcgacattggtatc
aaaggcctgcaccacttggtatgggaagtagtcgataactctatcgacgaagcactggcc
gggtactgcgacacgattgacgtaaccataaacgaagacaactccatcacggtgcgcgac
aacgggcgcggcattccggtggattttcaccagaaagaaggtcgctcggcgctggaggtt
gtaatgaccgtactgcacgccggcggcaaattcgacaaagacacctacaaagtgtcgggc
ggtttgcacggcgtgggcgtgagctgcgtgaacgcgctaagcaacctgctgcgtgtaacc
gtatacaaaaacggccacgtgtaccagcaggagtacgagcgcggcgccccgctgtacccc
gtgaagcagatcggcgataccgaccgcaacggcacacaggtggagttctggcccgacgac
tcgatcttcaccgagacggtgtaccgttacgaaaccattgccacgcgtttgcgcgagttg
tcgtacctgaacaagggcatccgcatcaacctgctcgacttgcgcgagaaggacgaaaac
ggcgtggcccgcggcgagcagttcttctcggagggcggtttgtcggagtttgtgcagtac
atcgacggcgagcgtaacgtgctgatgacgcgccccattcacgtggtgagcgagcggggc
ggcacgcccgtggaggtggccctgcagtacaacgattcgtaccaggagcacatcttctcc
tacgtcaacaacatcaacaccatcgagggcggcacgcacgtagcgggcttccgctcggcc
cttacccgcacgctcaaggcctacgccgataagtcgggcatgctggccaaagccaaggtg
gaggtgcagggcgacgacttccgcgagggcctcaccgccgttatttcggtgaaggtagcc
gagccgcagttcgaaggccagaccaaaaccaagctgggcaacaacgaggtaagcggtgcc
gtgaaccaagtggtgggcgaaatcctgaaccagtacctggaggaaaaccccaaggaggcc
atggtgattgtggagaaggtaatcctggctgccaaggctcgcattgccgcccgcaaagcc
cgcgaaatggtgcagcgcaaaaccgtgctgggctccaactcgctgcccggcaagctggcc
gactgctccgaatcggacccggctatttgcgaactgtacctggtagagggcgactcggcc
ggtggcacggccaagcagggccgcaaccgggctttccaagctattctgccgctgcgcggt
aaaatcctgaatgtggagaaggcgcaggagcaccacatctacgaaaaccaggaaatccgg
aacatgattacggccctgggcgtgagctttggggtgcccgccgatccggaaaacggcatc
gagaaggatgataaagcgctgaacatctcgaagctgcgctaccacaaggtcatcatcatg
accgacgccgatgtggacggctcgcacatccggacgctgatcctgacgttcttcttccgc
tacatgcgcgagctggtcgacaagggctacatctacatcgccctgccgccgttgtacctc
gtgaagaagggcaaagaggagcgttactgctggaccgaagtagagcgccaggccgccgtg
gaggagttggccaaaggccgccccgaatcggtgaacgtgcagcgctacaaaggcctaggt
gaaatgaacgccgagcagctctggactaccaccatgcagcccgaaacccgttcgctgaag
caggtaaccgtagaatcggcggccgaagccgaccacttgttctcgatgctgatgggcgac
gaggtggctccccgccgcgactttatcgagaagaacgccaaatatgccaagctggacgta
taa
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