Hymenobacter oligotrophus: D3Y59_07805
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Entry
D3Y59_07805 CDS
T05656
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hyh
Hymenobacter oligotrophus
Pathway
hyh00470
D-Amino acid metabolism
hyh00550
Peptidoglycan biosynthesis
hyh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D3Y59_07805 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D3Y59_07805 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyh01011
]
D3Y59_07805 (murD)
Enzymes [BR:
hyh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
D3Y59_07805 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hyh01011
]
Precursor biosynthesis
Amino acid ligase
D3Y59_07805 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
MurD_N
DUF4825
PE
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
AYA36969
UniProt:
A0A3B7R751
LinkDB
All DBs
Position
complement(1827756..1829129)
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AA seq
457 aa
AA seq
DB search
MSKIVILGSGESGVGAALLAHAKGHDVFVSDGGALKPVYKEKLDRAGIRYEEGAHTLEEI
LAADEIVKSPGIPEKAPVMQAVRAKGIRVISEIDLASRYTKAKSIGITGTNGKTTTTLLT
YHLLKEAGYKVGLAGNVGHSFAEQVIDDQFDWYVLELSSFQLDDTYDYAPTVAVLLNITP
DHLDRYEYSMQKYAQAKLRLTRNLDSSSYFIYNADDRLIEQEYQSVFVDTNDLPFTLADH
PERKCAAFFTAETTLRLDIPHVQADGYEEVSLANSPLIGQHNRQNQAAAIMAARVAGVSV
EQIEAALPRFHNADHRLQPVGEINGARFINDSKATNVEAAWFALDGVKAPLIWIAGGTDK
GNDYSTLVPLARDKVKALICLGADNAKLRQVFGEVVPQLEETQDVREAVRRAAALAAPGD
VVLLSPACASFDLFKNYEDRGRQFAQAVKDLALNTMT
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaatcgtaatcctaggttcgggcgaaagcggggtaggggcagcactgttggcg
cacgccaaagggcacgacgtgtttgtgtcggatggcggcgcgctgaagcccgtttacaag
gagaagctcgaccgggccggcatccgctacgaagaaggcgcgcacacgctggaagaaatt
ctggccgctgacgaaatcgtgaaaagcccggggattccggaaaaagcgcccgtaatgcag
gccgtgcgcgcgaaaggcatccgcgtgatttcggaaatcgacctggccagccgctacacc
aaagccaagagcattggcattacgggtaccaacggcaaaaccaccaccacgctgctcact
taccacctgctgaaggaagccggctacaaggtaggcttggctggcaacgtgggccactcg
tttgccgagcaagtaatcgacgaccagtttgattggtacgtgttggagctaagctcattt
cagctcgacgatacctacgactacgcgcccaccgtggcggtgctgctgaacatcacgccc
gaccacctcgaccgctacgagtactcgatgcagaagtacgcgcaggccaagctgcgcctt
acgcgcaacctggatagcagtagctacttcatttacaacgccgacgaccgcctgatcgag
caggagtaccaatcggtattcgtcgataccaacgacttaccgttcaccctggccgatcat
ccggagcgcaagtgtgctgcctttttcaccgccgaaaccacgctgcgccttgacattccg
cacgtgcaggccgacggctacgaggaagtaagccttgccaactcgccgctgattggccag
cacaaccggcagaaccaagctgcggccattatggctgcgcgcgtggctggggtttcggtc
gagcaaattgaggccgcgctgcctaggttccacaacgcagaccaccgcctgcagcccgtg
ggcgaaatcaacggtgcccgcttcatcaacgactccaaagccaccaacgtggaggccgct
tggtttgccctcgatggcgtaaaggctccgctgatatggattgcgggcggcaccgacaaa
ggcaacgattacagcacgctcgtgccgctggcccgcgacaaggtgaaggcgctgatttgc
ctaggtgccgacaacgccaagctgcgccaagtgttcggtgaggtagtgccgcaactggag
gaaacgcaggacgtgcgcgaggccgtgcgccgcgccgccgcgctggccgcccccggcgac
gtggtgctgctgtcgcccgcctgcgcctcgttcgacttgttcaaaaactacgaagaccgc
ggccggcaattcgcgcaggcagtcaaggatttagcattaaataccatgacataa
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