Hymenobacter oligotrophus: D3Y59_08020
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Entry
D3Y59_08020 CDS
T05656
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hyh
Hymenobacter oligotrophus
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyh03400
]
D3Y59_08020 (sbcD)
DNA repair and recombination proteins [BR:
hyh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D3Y59_08020 (sbcD)
Archaeal homologous recombinant proteins
D3Y59_08020 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Oxidored_nitro
Metallophos_3
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
AYA37007
UniProt:
A0A3B7RS97
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All DBs
Position
1877167..1878399
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AA seq
410 aa
AA seq
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MRVLHTADWHLGQRFISGHERTEEHRHFLEWLVRTVQERQVEVLVLAGDVFDTGSPSSAA
LELYYSFLVQLRQTYCRDIVIVGGNHDSPATLNAPARLLRHLRVHVVGCVPDCFDDQVLI
LDDVTGQPGLVVCAVPFLRDRDVRLSLPGETAEERESRIKQGIADHYARVAECERVWQHK
ANGLPVLATGHLYAAGGSASDSERTIHVGNLGQVTADHFSDCFDYVALGHLHRPQRVGGR
EHIRYSGSPIPLSFSEIHDPKQVLLLEFKGTGCPRIEAIAVPTSRRLVRFHGDLEEVLNQ
LAAYDNAGLPLPAWADVEIRSEIGQLEVAEQLLKVIEKLDRKQIEVLARRHFRIVTLRPL
GETGAEPLTRSLHDFSEREVFERRLEGEPEDGREVLLRTFDELVELMHSR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcctgcacaccgccgattggcacttaggccaacgcttcatcagcggccatgag
cgcaccgaggagcaccgccattttctggagtggctggtgagaaccgtgcaggagcggcag
gtggaagtgctggtgctggccggcgacgtgttcgacaccggctcgccctctagcgccgcg
ctcgagctgtactactcctttttggtgcagctgcgccaaacctactgccgcgacatagtg
attgtgggcggcaaccacgactcgccggccacgctcaatgccccggcccgcctgctacgc
cacttgcgcgtgcacgtggtgggctgcgtgcccgattgcttcgacgaccaagtgctgata
ctggacgacgtcacgggccaacccggactggtggtgtgcgccgttcctttcctccgcgac
cgtgacgtgcgcctctcgctgcccggcgaaaccgccgaggagcgcgaaagccgcattaaa
caaggtattgctgaccactacgctcgcgtggccgagtgcgagcgggtttggcagcacaaa
gccaacggcttgcccgtgctagccaccggccacctctacgccgccggcgggtcggcttcc
gactcggaacgcaccattcacgtgggcaacctagggcaggtaacggccgaccacttttcc
gattgcttcgactacgtggccctaggtcacttgcaccgcccgcagcgtgtgggcggccgc
gagcatatccgctacagcggctcccccattccgctgtcgttttccgaaatccacgacccc
aagcaggtattgctgctcgagttcaaaggcacgggctgcccccgcatcgaggccattgca
gtgcctacctcccgccgcctcgtccgtttccacggcgacctggaggaagtattaaaccag
cttgccgcctacgacaacgccgggctgcccctgcccgcctgggccgatgtagaaatccgc
tccgaaataggccagctcgaggtagccgagcagttgctcaaggttatcgagaagctcgac
cgcaagcagattgaagtgctggcccgccggcatttccgcatcgtaacgctccggcccctc
ggcgaaaccggagccgagccactcacccgcagcctgcacgacttttcggagcgagaggtg
tttgagcgccgcttagagggcgagccggaagacggccgcgaggtgctgctgcgcaccttc
gacgagttggtggagttgatgcactcgcggtag
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