Hymenobacter oligotrophus: D3Y59_08790
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Entry
D3Y59_08790 CDS
T05656
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hyh
Hymenobacter oligotrophus
Pathway
hyh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D3Y59_08790 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hyh01007
]
D3Y59_08790 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyh03016
]
D3Y59_08790 (lysS)
Enzymes [BR:
hyh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
D3Y59_08790 (lysS)
Amino acid related enzymes [BR:
hyh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
D3Y59_08790 (lysS)
Transfer RNA biogenesis [BR:
hyh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
D3Y59_08790 (lysS)
Prokaryotic type
Other AARSs
D3Y59_08790 (lysS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AYA37138
UniProt:
A0A3B7QVL3
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All DBs
Position
2051248..2052810
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AA seq
520 aa
AA seq
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MHHLSEQELIRRQKLDELQKLGIEPYPSELFDVNFYAQEIHDNYHPELNNFQEVRLAGRL
MSVRVKGKASFAELQDASGRIQLYINRDEICPGEDKELYNTVFKKLLDLGDFIAVEGHVF
KTMVGETSVHVTSFKLLSKALRPLPVVKERVDEATGEKITYDAFTDPEQRYRQRYVDLVV
NPHVRDAFVKRTLLVQAMRNYLNDKGYLEVETPILQPLYGGAAARPFKTHHNTLDMTLYL
RIANELYLKRLIVGGFDGVYEFSKDFRNEGMSRFHNPEFTQMELYVAYKDYYWMMDLVEE
MVERVALVLHGQTEVKVGENIINFQRPWKRFTMAEAIEHYTGFNIEGKSEDELRAAAKDL
KVGLDPSMGKAKIIDEIFGEHVEPKLIQPTFITDYPVEMSPLAKKHRSKPGLVERFEAIC
NGKEICNAFSELNDPIDQRKRFEDQLELGKRGDTEAMVLDEDFLRALEYGMPPTAGLGIG
IDRLSMIMTNSHSIQDVLFFPQMKPEKAETLTEKSEKPVE
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacctcagcgaacaggagctgattcgtcggcagaaactcgacgaactccaaaag
ctcggcatcgagccgtacccgtccgagctgttcgacgtgaacttctacgcccaggaaatt
cacgataactaccaccccgagctcaacaactttcaggaagtgcgcctggcgggccgcctg
atgtcggtgcgggtgaagggcaaggcctcgtttgccgaactgcaagacgcctcgggccgc
attcagctctacatcaaccgcgacgagatttgccccggcgaggacaaggagctgtacaac
accgtgttcaagaagctgctcgacctaggcgacttcattgccgtggagggccacgtgttc
aaaacgatggtgggcgaaacctcggtgcacgttactagcttcaagctgctctcgaaagcc
ctgcgcccgctgccggtagtaaaagagcgcgtagacgaggcaacgggtgaaaaaatcacc
tacgatgcctttaccgaccctgagcagcgctaccgccagcgctacgttgacttggtggtg
aacccgcacgtgcgcgacgccttcgtgaagcgtacgctgctggtgcaggccatgcgcaac
tacctcaacgacaaaggctacctggaggtagaaacccctattctgcagccgttgtacggc
ggggccgcggcgcgtcctttcaaaacgcaccacaacaccttggacatgacgctgtacctg
cgcattgccaacgagttgtacctgaagcgtctgattgtaggcgggttcgatggcgtgtac
gagttctcgaaggacttccgcaacgagggcatgtcgcgcttccacaaccccgagttcacc
cagatggagctgtacgtagcttacaaagactactactggatgatggacttggtggaagag
atggtggagcgcgtagcgctggtcctgcacggccaaaccgaggtgaaggtgggcgagaac
atcatcaacttccagcgcccctggaagcgcttcaccatggccgaagccattgagcactac
accggcttcaacatcgaaggcaagagcgaagacgaactgcgcgccgccgccaaggacctg
aaagtgggcctcgatcccagcatgggcaaagccaagatcatcgacgagattttcggggag
cacgtggagcccaagctgattcagcccacgttcattaccgactaccccgtggaaatgtcg
ccgctggcgaaaaagcaccgctcgaagccgggcttggtagagcgtttcgaagccatctgc
aacggcaaagaaatctgcaacgccttctcggagctaaacgaccccatcgaccagcgcaag
cgttttgaggaccaactggagctgggcaagcgcggcgacaccgaagccatggtgctcgat
gaggactttctgcgcgccttggagtacggcatgccgcccacggctggcctaggtatcggc
atcgaccgcctctcgatgatcatgaccaactcgcactcgattcaggacgtgctcttcttc
ccgcagatgaagccggagaaagcggaaaccctaacggaaaaatcggaaaagccggtagag
taa
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