Hymenobacter oligotrophus: D3Y59_09870
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Entry
D3Y59_09870 CDS
T05656
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hyh
Hymenobacter oligotrophus
Pathway
hyh03030
DNA replication
hyh03430
Mismatch repair
hyh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D3Y59_09870
03430 Mismatch repair
D3Y59_09870
03440 Homologous recombination
D3Y59_09870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyh03032
]
D3Y59_09870
03400 DNA repair and recombination proteins [BR:
hyh03400
]
D3Y59_09870
Enzymes [BR:
hyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D3Y59_09870
DNA replication proteins [BR:
hyh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D3Y59_09870
DNA repair and recombination proteins [BR:
hyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D3Y59_09870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
AAA_22
RuvB_N
AAA_5
AAA_14
AAA_30
AAA_2
Mg_chelatase
AAA_24
Rad17
AAA_18
AAA_7
AAA_assoc_2
AAA_19
AAA_33
RNA_helicase
AAA_16
DNA_pol3_delta_C
VapE-like_dom
AAA_28
nSTAND3
DUF815
Motif
Other DBs
NCBI-ProteinID:
AYA37331
UniProt:
A0A3B7R882
LinkDB
All DBs
Position
2298140..2300161
Genome browser
AA seq
673 aa
AA seq
DB search
MENFVVSARKYRPATFRSVVGQQHVTTTLQNAIVTGHLAQAFLFCGPRGVGKTTCARILA
KTINCTSLTPEAEACNECDSCRAFNQSASFNVHELDAASNNSVEDIRSLVEQVRYVPQQG
RYKVYIIDEVHMLSNAAFNAFLKTLEEPPGYAIFILATTERHKIIPTILSRCQIFDFNRI
KLDDIVGHLGYIAGKEQVTAEDDALHLIAQKADGGLRDALSIFDQMVTFSGHQLSYRAVV
QNLHVLDYEYYFRLTEACLTQNLSATLLLLEEVVQNGFDLHQFVIGAAEHLRGLLVCKDP
QTVQLLEVSEGLRQRYADQARQAPLSFLVTGLNLLSQCDRDFKAAKNQRLHVELALMKLA
YLRNAVQLTHDLVAGAQLASSGNGEAKKKTDGVASAAPAVPAPIGNPTGYAPNGHASAVR
ETAAPSYPKANGAPVAAPAAPEPIVPVQSGVEELHPTPSIETELEEVPSTRRQLVDTLPH
VETGRPSVAGHEPGSRALVAEPVAAAAPGSARPAPKPIAIPKLNLQAVKAQATQRQEAAA
AVLEEEAAAPVTGTVNQAMLQQVWRELAEARKQISMSEFMTLNRPIQADEQHVIRLQLEN
PVQLDQFNAFKPEFLSALRQRTGYRSLTIHTEVTEQVQTGKRLYTSSDKFEYLAEKFPVL
HEMKHRLGLDTDF
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggagaatttcgtcgtttcggctcgtaagtaccgccccgctacttttcggagtgtagtt
gggcagcagcacgtgaccaccacgctgcaaaacgccattgttaccggccacttggcccag
gcgtttctgttttgcggtccgcgcggtgtgggcaaaaccacctgtgcccgcattctggcc
aaaaccatcaactgcaccagcctcacgcccgaggccgaagcctgcaacgagtgcgactcg
tgtcgggccttcaaccaaagcgcctcgtttaatgtgcacgagctcgacgcggcctcgaac
aactccgtggaggacatccgctccctggtggagcaggtacgctacgtcccgcagcaaggc
cgttacaaggtgtacatcatcgacgaggtgcacatgctctcgaatgcggctttcaatgcc
ttccttaaaacgctggaagagccgccgggctacgccatttttattctggccaccaccgag
cgccacaaaatcattcccacgattctgtcgcgctgccagatcttcgactttaaccgcatc
aagctcgacgacatcgttgggcacctaggctacattgccggcaaagagcaagtaactgcc
gaagacgacgcgctgcacctgattgcccaaaaagccgacggcggcctgcgcgacgcgctc
agcattttcgaccagatggtgaccttctcgggccatcagctgagctaccgcgcggtggtg
caaaacctgcacgtgctcgattacgagtactatttccgccttaccgaagcctgcctaacc
caaaacctttcggccacgctgctgctgctcgaggaggtggtgcagaacggcttcgacctg
caccagtttgtgattggtgccgccgagcacctgcgcggcctgctggtgtgcaaagacccg
caaaccgtccagctcctggaagtatcggaaggcttgcgccagcgctacgccgaccaagcc
cgccaggccccgcttagcttcttggtaacgggactgaacctgctcagccagtgcgaccgg
gactttaaagctgccaaaaaccagcgcctgcacgtggagttggccctgatgaagctggct
tacctgcgcaatgccgtgcaactcacccacgatttggtggccggtgcgcagctagcttcg
tcgggcaacggcgaggctaaaaaaaaaactgatggtgtagcctctgctgcgcctgccgtg
ccggcccccatcggcaaccccactgggtacgcgcccaacggccacgcgtcggccgtgcgc
gaaacggcggctccctcctaccccaaagccaacggcgcgcccgtggcagcgccggccgct
ccggagcccattgtgccggtgcaaagcggcgttgaggagttgcaccccacgcccagcatc
gaaacggagctggaggaagtgccctccacgcgccggcagctggtggataccctgccgcac
gtagaaaccggccgccctagcgtggccggccacgagccgggcagccgggctttggtggcc
gagcccgtagcggccgctgcacccggcagtgcccgccccgcgcccaagcccattgccatt
ccgaagctaaacctgcaggcggtgaaagcccaggccacgcagcgccaggaagccgcggcg
gccgtgctggaggaagaagccgccgcaccggtcacgggcaccgtcaaccaagctatgctg
cagcaggtgtggcgcgagttggccgaagcccgcaagcaaatcagcatgagcgagtttatg
acgttgaaccggcccattcaggccgatgaacagcacgtgattcgcctgcagctcgaaaac
ccggtgcagcttgaccagttcaacgcgttcaagcccgagtttttgtcggccttgcgccag
cgcaccggctaccggtcgctcaccatccacaccgaagtaacggagcaggtgcaaaccggc
aagcgcctctacacctcgtcggataagtttgagtacctggccgaaaagtttccggtgctg
cacgagatgaagcaccgcctaggtctggacaccgacttttaa
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