Hymenobacter oligotrophus: D3Y59_10800
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Entry
D3Y59_10800 CDS
T05656
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hyh
Hymenobacter oligotrophus
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyh01011
]
D3Y59_10800
Enzymes [BR:
hyh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
D3Y59_10800
Peptidoglycan biosynthesis and degradation proteins [BR:
hyh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
D3Y59_10800
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GFIT
Motif
Pfam:
LysM
SLT
LysM2_CERK1_LYK3_4_5
HTH_Tnp_1
Acyl-CoA_dh_2
MOV-10_N
Motif
Other DBs
NCBI-ProteinID:
AYA37492
UniProt:
A0A3B7R135
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Position
2524286..2526337
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AA seq
683 aa
AA seq
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MKNPFRASALLLLAAAFAHPVAGQTQLPPAAPPAAGTDLDSTQVQLELAPDSLVAEPALT
PEQLAWMQTPPAMRDLVCDRIGCIDSDMPLVFNNVVMAHVTYFTQRNRTYMQRVLERENL
YFPLFEKYLAKYNLPQDLKYLAVVESALIPTAKSRVGATGLWQFMGPTAGDLRLRRDDWV
DERMDPEKATEAACKHLRFLYGMLHDWELVLAAYNWGPGNVQRVMRRTGKRNYWDLHPHM
PQETRNYVPSFTAILYAMKYAQQHNLHAPDLRYQYAQPMDTLQIGGRAFDVSRLGQAAGL
DSVALLRMNPELRKTYLPAGYRPYAVKFPAAARPLLQEVDRATLFGYCTPQAALPQPIAA
LPPRLQGVEPFPSALAANANNTPRNANREVAAAAETPRSRRKVHTVRKGQTLGELAEWYG
VSTAQLRRWNHLPKGQALRSKQQLVVFLPAQESSNAATVAMARKPAAPAVAAAPRTPGEM
GVKVTKRPVAASDKAEPATVATPEPAGTAAVAAATPRLATRSARTATEPTPTTEPTASEA
TVAQAQAQIEAATEYVVRKGDYLNKVARERGVTVAQLMEWNKLQSAAVAPGQKLRLTQPA
DTETTLPVSSPAKTVALAPKPAAPTKQRQHLGSEQQRVHVVQPGDTLFNISRRYQGLTVE
QLRKLNNLKSDEVKPGQKLIVAG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatccgttccgcgcctctgctttgctgttgttggctgctgcctttgcgcacccg
gttgcgggccaaacgcaattgccacccgcagcaccgccagcggccggaacggatttggac
tcgacgcaggtgcagctggagctggcgcccgactcgctggtagccgagcctgcccttacc
cccgaacagctggcgtggatgcagaccccgcccgccatgcgcgatttagtgtgcgaccgg
attggctgcatcgactcggacatgccgctggtgttcaacaacgtggtaatggcgcacgtg
acgtacttcacacagcgcaaccgcacgtacatgcagcgggtactggagcgcgaaaacctt
tactttccgctgttcgaaaagtacctggccaagtacaacctgccgcaagatcttaagtac
ttggccgtagtagagtcggcgttgattccgacggccaagtcgcgggtaggcgctaccggg
ctgtggcaatttatgggccccactgccggcgaccttcgcctacgccgcgacgactgggta
gacgagcgcatggaccccgaaaaagccactgaggccgcttgtaagcacctgcgttttctg
tacggcatgctccacgactgggagctggtgctggctgcctacaactggggccccggcaat
gtgcagcgcgtaatgcgccgcacgggcaagcgtaactactgggacctgcacccgcacatg
ccgcaggaaacgcgcaactacgtgcccagcttcacggccattttgtacgccatgaagtac
gcgcagcagcacaacctacacgcccccgacctgcgctaccagtacgcgcagcccatggat
acgctgcaaattggcggccgcgctttcgacgtaagccgccttggccaagccgccggcctc
gattcggtagccctgctgcgcatgaacccggagttgcgcaaaacctacttgcctgccggc
taccgcccctacgccgttaagttcccggccgcggcaaggccgttgctgcaagaggtagac
cgagccaccttgtttggctactgcacgccccaagccgccctgccgcagcccatagccgct
ttgccacctaggttgcagggcgtagagccgttcccgtcggcgctggcggccaatgctaac
aacacccccaggaacgccaatcgcgaagtagccgccgcggccgaaacgccgcgctcgcgc
cgcaaggtgcacaccgtgcgcaaagggcaaaccctaggtgagctagccgaatggtacggc
gtgagcaccgcgcaactccggcgctggaaccacttgcccaaaggccaggctctgcgttcg
aagcaacagcttgtggtatttctgccggctcaggaaagcagcaatgctgccaccgtggcc
atggcccgtaagcctgccgccccggccgttgccgccgcaccgcgcacacccggcgaaatg
ggcgttaaagtaaccaagcgccccgttgctgcttcggataaagctgagccagcaacggtg
gcaacgccagaaccagctggcacggccgcagtagccgctgctacgccccgcctcgctacc
cgctcggcgcggacggcaaccgagccaaccccaaccactgagcctaccgcatccgaagca
accgttgcgcaggcccaggcgcaaattgaagctgccaccgagtacgtggtgcgcaaaggc
gactacctcaacaaggtagcgcgcgagcgaggtgttacggtggcccagctgatggagtgg
aacaagttgcagtcggcggcggtagcacccggccaaaagctgcgcctcacccaacccgcc
gacactgaaacgaccctgccggtttcttcacctgcaaaaacggttgccttggcccccaag
cctgctgcgcctaccaagcagcggcagcacctagggtccgagcagcagcgcgtgcacgtg
gtgcagcccggcgatacactgttcaacatttcgcgccgttaccaggggcttaccgttgag
cagttgcgcaagctcaacaacctcaaatccgacgaggtaaaacctggccagaagttgatt
gtggccggttaa
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