Hymenobacter oligotrophus: D3Y59_11845
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Entry
D3Y59_11845 CDS
T05656
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
hyh
Hymenobacter oligotrophus
Pathway
hyh00260
Glycine, serine and threonine metabolism
hyh00630
Glyoxylate and dicarboxylate metabolism
hyh00670
One carbon pool by folate
hyh00785
Lipoic acid metabolism
hyh01100
Metabolic pathways
hyh01110
Biosynthesis of secondary metabolites
hyh01200
Carbon metabolism
Module
hyh_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
D3Y59_11845 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
D3Y59_11845 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
D3Y59_11845 (gcvP)
00670 One carbon pool by folate
D3Y59_11845 (gcvP)
Enzymes [BR:
hyh01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
D3Y59_11845 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AYA37677
UniProt:
A0A3B7RTX0
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All DBs
Position
2772702..2775620
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AA seq
972 aa
AA seq
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MKLSFKPADVFVDRHNGPDAVAVAEMLQTIGVESVDQLINETVPARIRLKRELNLPAALT
ERQFLQKFKQIAGQNKVFRSFIGLGYHDTQLPPVILRNIMENPGWYTAYTPYQAEIAQGR
LEALINYQTMVIELTGLEIANASLLDEGTAAAEAMNMFHGLTKKKNATKFFVSEQVLPQT
IDVLRTRATPLGIELIVGDHRSTDLSDEAIFGGLVQYPAADGEVFDYTDFIAQAHERGQF
VAVAADLLALTLLTSPGEMGADAVVGNSQRFGVPMGYGGPHAGFFATKDAYKRVIPGRII
GQSVDATGNRAYRMALQTREQHIRREKATSNICTAQVLLSVIAGMYAVYHGPERLKQIAT
NVHLLTRQLAEGLRGLGAELLVENYFDTVSLKLESAELQQALKRELEAVGINLRYFGESN
VGISLHQNAEPQDVADILGAFGKVLGKQAAGSVAVPADAELVWPANLIRKSEFLKHEVFN
THHSEHELLRYMKQLENKDLSLTHSMISLGSCTMKLNATAEMIPVTWPEIGQLHPFAPRE
QAQGYSQIFKDLEAWLCEVTGFDAVSLQPNSGAQGEYAGLLVIKAYHDARGDHHRNVALI
PASAHGTNPASAAMVGMQIVVVKSTERGEIDLDDLRAKAEQYSDKLSCLMVTYPSTHGVY
EESIIDICNIIHEHGGRVYMDGANMNAQVGLTSPANIGADVCHLNLHKTFCIPHGGGGPG
VGPIGVVADLAPYLPGHVVVDADGRTEGAVSAAPWGSASILPISYAYIAMMGGEGLKAAT
ETAILNANYIKARLEEHYPVLYTGENGRCAHEMILDCRQFKKAGIEVEDIAKRLMDYGYH
APTVSFPVAGTLMVEPTESESKEELDRFCEAMIKIREEIRAVEEGRADAKDNLLKHAPHT
AAVLLQEEWTRPYTREQAAYPTDFARRYKFWPTVSRIDSAYGDRNLICACTPIEAYADQE
EHLVPTDKGPSY
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtccttcaagcccgccgacgtgttcgttgaccgccacaacggtcctgacgcc
gtggccgtggccgagatgctgcaaaccatcggcgttgagtcggtggatcagctcatcaat
gaaaccgtaccggcccgcatccggctgaagcgcgagctgaacctgcccgcggctcttacc
gagcgccagtttctgcagaagttcaagcagattgccggccaaaacaaagtgttccgctcg
tttatcggcctgggttaccacgacacccagctgccgccggtaatcctgcgcaacatcatg
gaaaaccccggctggtacacggcttacacgccctaccaggccgaaattgcgcaaggccgc
ctcgaagccctcatcaactaccaaacaatggtaattgagctgacgggcctcgaaattgcc
aacgcttcgttgctcgacgaaggcaccgccgccgccgaagccatgaacatgttccatggc
ctcaccaaaaagaagaacgccaccaagttctttgtgtcggagcaggtgctgccccaaacc
atcgacgtgctgcgcacgcgcgccacgcccctgggcatcgagctgattgtgggcgaccac
cgcagcaccgacctcagcgacgaagccatttttggcggcctggtgcagtaccccgccgcc
gacggcgaggtgttcgattacaccgatttcatcgcccaagcccacgagcgcggccagttt
gtggccgtagctgccgacctgctggcccttacgctgctcacctcgcccggcgagatgggc
gccgatgccgtggtgggcaactcgcaacgctttggcgtaccgatgggctacggcggcccg
cacgccggtttctttgctaccaaggatgcgtacaagcgcgtaattccgggccgcatcatc
ggccagagcgtggacgccaccggcaaccgcgcctaccgcatggccctgcaaacgcgcgag
cagcacatccgccgcgaaaaggccacctccaacatttgcaccgcgcaggtgctgctgtcg
gttattgccggcatgtacgccgtgtaccacggccccgagcgcctcaagcaaattgccacc
aacgtgcacctgctcacgcgccagctggccgagggcctgcgcggcttaggcgccgagttg
ctggtggagaattacttcgatactgtttcgctgaagctggaaagcgccgagctgcagcaa
gccctgaagcgcgagctggaagccgtaggcatcaacctgcgctactttggcgaaagcaac
gtgggcatttcgctgcaccaaaacgccgagccgcaagacgtagccgacatcctaggtgcg
tttggcaaggtgttgggcaagcaggcagctggttcggttgcagtgccggccgatgccgag
ctggtgtggcccgctaacctcatccgcaagtcggagttcctgaagcacgaggtgttcaac
acgcaccactcggagcacgagttgctgcgctacatgaagcagctcgagaacaaagacctc
tcgctgacgcactcgatgatttcgctgggctcgtgcaccatgaagctcaacgctaccgcc
gagatgattccggtcacctggcccgagattggccagttgcaccccttcgcgccgcgcgag
caggcgcaaggctactcgcaaatcttcaaagacctggaggcctggctgtgcgaggttacc
ggtttcgatgccgtttcgctgcagcccaactcgggtgcgcagggcgaatacgccggcttg
ctcgtaattaaggcgtaccacgacgcccgcggcgaccaccaccgcaacgtggcccttatt
ccggcctcggcccacggcaccaacccggcttcggcggccatggtgggcatgcagattgtg
gtagtgaaaagcaccgagcgcggcgaaatcgacctcgacgacctgcgcgccaaggccgag
cagtactccgataagctgagctgcctgatggtgacctaccccagcacgcacggcgtgtac
gaggagagcatcatcgacatctgcaacatcattcacgagcacggcggccgcgtgtacatg
gacggcgccaacatgaacgcccaagtaggcctcacgtcgcccgccaacatcggcgccgac
gtgtgccacctgaacctgcacaaaaccttctgcattccgcacggcggcggcggccccggc
gtaggccccatcggcgtagtagccgacctggccccctacctgcccggccacgtggtggta
gatgccgacggccgcaccgaaggcgctgtttcggccgctccgtggggctcggccagcatt
ctgcccatttcgtacgcctacatcgccatgatgggcggcgaaggcctgaaggcagccacc
gaaacggctatcctgaacgcgaactacattaaggctcgcctcgaggagcactacccggtg
ctgtacacgggcgaaaacggccgttgcgcccacgaaatgattctcgactgccgccagttc
aagaaagctggcattgaggtggaggacattgccaagcgcctgatggactacggctaccac
gcgcccaccgtgtcgttcccggtggcaggcacgcttatggtggagcccaccgagtcggaa
agcaaggaggaactggaccgcttctgcgaggccatgatcaagatccgtgaggagattcgg
gctgtggaagaagggcgcgccgatgccaaagacaacctgctgaagcacgcgccgcacacc
gccgccgtgctgctgcaggaagaatggacgcgcccctacacccgcgagcaggccgcttac
cccactgacttcgcccgtcgctacaagttctggcccaccgtgtcgcgcatcgactcggcg
tacggcgaccggaacctgatttgcgcttgcacgcccatcgaggcctacgccgaccaggag
gagcacctcgtgcccaccgacaaaggtccgtcgtattga
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