Hymenobacter oligotrophus: D3Y59_11945
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Entry
D3Y59_11945 CDS
T05656
Name
(GenBank) peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hyh
Hymenobacter oligotrophus
Pathway
hyh00550
Peptidoglycan biosynthesis
hyh01100
Metabolic pathways
hyh01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D3Y59_11945
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D3Y59_11945
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyh01011
]
D3Y59_11945
Enzymes [BR:
hyh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
D3Y59_11945
Peptidoglycan biosynthesis and degradation proteins [BR:
hyh01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
D3Y59_11945
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AYA37696
UniProt:
A0A3B7REL1
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Position
2792105..2793910
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AA seq
601 aa
AA seq
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MSLLTILLAVMAGAFAEPASAAGRPLPDTTHTGYTRRRVVLPERPQRGRILDRHDSVLVA
TRSQYLLRLPRRPPIDSLALSQLLGWNMGTLRRRVADALPYPGARAGYPVELRLTAAEAA
RVRKQQRAWPELALTDRRRRTYTTAVGAPVLGYASAEAEAFLTQAQRARRGRFYRLRNGG
VEAYYNGLLAGHVGVQHPLVDSLGQPHGRWAPDTAFQPGQDLHLSLDVKLQAYAEQLLGK
RKGYLVALDPRTGEVLAYVSAPTYRPATLTAPDQAGVRAKLLQHEKMPLLNRPATQANPP
GSVFKLVNAAVALQLGAISPATGFRCDQTLVRCVHRHPVPKDLTTGLKYSCNPYFYRVLE
RLITRVPDSLAADSATLIRHANLAQWRRYARSFGLDSVLGVDLPREAPGFLPTATYYDKA
RGTRNWSYRSVYSLSIGQGEINLTGLQMANLAAIIANRGWYYPPHLVRSIGTDGPLPRFA
ERQRTLVDSVHFAALVPGMVAVLQPGGTAETSSLGDVGITVAGKTGTVENDEGDDHAAFI
GFAPADNPKIAVAVYLENAGFGATAAAPCGVLVIEKYLRGSIAPRRKRLEQRAQHRGRRG
Y
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgttgaccatactgctggccgtcatggccggcgctttcgccgagcctgcctct
gctgccggccggccgctgcccgacactacccacactgggtatactcgccgccgcgttgtg
ttgcccgaacggccgcagcgcggccgcatcttggaccgccacgattcggtgctggtggcc
acccgttctcaatacttgttgcggctgccccgccgtccgccgatcgactccctagccttg
agccagctactaggctggaacatgggcaccttgcgccgccgcgtggccgacgcactgcct
taccccggtgcccgtgcggggtatcctgtggagcttcgcctaacggcggcagaagcagca
cgggtacgcaagcagcaacgcgcttggcccgagctagcccttaccgaccggcgtcgacgc
acctatacgacagccgttggcgccccggtactggggtatgcaagtgccgaagcagaagcg
ttcttgactcaggcgcaacgcgcccgccgcggacgtttctaccgcctgcgcaacgggggt
gtcgaggcctattacaacggcctgctcgccgggcacgtgggcgtacagcacccgttggtg
gattcgctgggccagccgcacggccggtgggcccccgacacggcgttccaaccgggccag
gacttgcacctgagcctggacgtgaaactgcaagcctacgccgaacagctgctgggcaag
cgcaagggctacctcgtagccctggatccgcgcaccggagaagttttggcctacgtatcg
gcgcccacttaccgaccggccacacttaccgcaccagaccaggccggcgtgcgcgccaag
ctgctgcagcacgaaaagatgccgttgctaaaccggccagccacgcaagctaaccctccc
ggctcggtatttaagctcgtcaacgcggcggtggccttgcagctgggcgccattagtccc
gctaccggatttcgctgcgaccagacgctggtccgctgcgtgcaccgccaccccgtgcct
aaggacctgaccaccgggctcaagtacagctgcaatccgtatttctaccgcgtgctggag
cgcctcatcacccgcgtgcccgacagcctcgcggccgactcggcgacgctcatccgccac
gccaacctggcccagtggcgccgctacgcccgctccttcgggctcgactcggtattgggt
gtcgacctgccgcgcgaagcgccgggctttctgcccaccgcgacttattacgacaaggcc
cggggcacccgcaactggtcgtaccggtccgtatactcgctcagcatcgggcagggcgag
attaacctgaccgggttgcaaatggccaacctggcggccatcattgccaaccgcggatgg
tactatccgccccacttagtgcgcagcatcgggaccgacgggccgctgccgcgctttgcc
gagcgccaacgcaccctcgtcgacagcgtgcatttcgcggcgctagtgccgggcatggtt
gcggtgctgcagcccggcggcacggccgaaacctctagcctgggcgacgtgggcattacg
gtggcgggcaaaaccggcaccgtggaaaacgacgagggcgacgaccacgcggcctttatc
ggcttcgccccagccgataacccgaaaatagccgtggccgtgtacttggaaaacgccggc
ttcggggccactgccgccgcgccttgcggagtcctggtgatcgagaagtacctacgcggc
tccatcgcgccgcggcgcaagcgcctggaacaacgggcccaacaccggggccggcgcggc
tattag
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