Hymenobacter oligotrophus: D3Y59_16285
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Entry
D3Y59_16285 CDS
T05656
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hyh
Hymenobacter oligotrophus
Pathway
hyh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D3Y59_16285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyh03021
]
D3Y59_16285
03400 DNA repair and recombination proteins [BR:
hyh03400
]
D3Y59_16285
Enzymes [BR:
hyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D3Y59_16285
Transcription machinery [BR:
hyh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D3Y59_16285
DNA repair and recombination proteins [BR:
hyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D3Y59_16285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AYA38470
UniProt:
A0A3B7R556
LinkDB
All DBs
Position
3776660..3777649
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPEKVVMEKSDDFYGTFEFKPLEKGYGVTIGNALRRILLSSLEGYAITSVRTS
NVLHEFQTIEGVIEDMSEIILNLKQVRFKKINDVIEDKITVRISGQESFTAGDINKFTNG
FQVLNPDLVICNIDPSTSLEFEFTVQKGRGYVPAEENKPADQVFGQIAIDAIFTPIKNVK
YSIENTRVEQKTDYEKLLLEIHTDGSIHPEDALKGAANILIQHFMLFSDNTMTFETAKAE
EETSVDEETLHMRKVLKTPLQDMDLSVRAYNCLKAADIKTLGDLVQLDLADMMKFRNFGK
KSLTELENLVEEKGLHFGMDVSRFRLDEE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattctcgcttttcaaatgccggagaaagtcgtgatggagaaatccgacgacttc
tacggaacgtttgagtttaaaccgctggagaagggttacggcgtgacgatcggcaacgcg
ctacgtcgcattctgctgtcgtcgctcgaggggtacgcgattacctcggtccgcacgagc
aacgtgctgcacgagtttcagaccattgagggtgtcatagaggacatgtcagaaatcatt
ttgaacctgaagcaagttcggttcaaaaagattaacgatgttatcgaagacaaaatcacg
gttcgcatcagcggacaagaatccttcactgccggcgatatcaacaagttcaccaacggt
ttccaagtgctgaacccggatctggtgatctgcaacattgacccgagcacttcgctggag
tttgagtttacggttcagaagggccgtggctacgtaccggcagaagagaacaagccggct
gaccaagtattcggtcagattgcgattgatgccatcttcacgccgatcaagaacgtgaag
tacagcattgagaacacccgcgtggagcagaagacagactatgaaaagctgctgctcgaa
attcacacggacggctcgattcatccggaggatgcgctgaaaggagctgccaacatcctg
attcagcacttcatgttgttctcggacaacacgatgaccttcgaaacggctaaagccgag
gaggagaccagcgtggacgaagagacgctgcacatgcgcaaggtcctcaagaccccgctg
caggacatggacctgtcggtgcgtgcttacaactgcttgaaggcggccgacatcaagacg
cttggcgacctagtgcaactggacctcgccgacatgatgaagttccgtaacttcggtaag
aagtcgctgaccgagctggagaacctcgttgaggaaaaaggcctccactttggtatggac
gtgtcgcggttccgcctcgacgaagaatag
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