Hymenobacter oligotrophus: D3Y59_16540
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Entry
D3Y59_16540 CDS
T05656
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K18954
AraC family transcriptional regulator, transcriptional activator of pobA
Organism
hyh
Hymenobacter oligotrophus
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyh03000
]
D3Y59_16540
Transcription factors [BR:
hyh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
D3Y59_16540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
AraC_binding
HTH_AraC
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
AYA38513
UniProt:
A0A3B7R516
LinkDB
All DBs
Position
complement(3836189..3837052)
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AA seq
287 aa
AA seq
DB search
MKPAAVPVLCIDAFPHTPPQTPFRLQRLEELRASFADVNEPHAHDFYVLLYFTHGHGTHT
IDFVTYEVRPGALFFLAPGQVHSWSLSDDTRGIDIFFAPEFYLLRHTAERLYSYPFFGPH
GQPVLYLPPNEPLIGPLLWRMEQEHAMPSPNQQEVLRSYLHLVLELAARQHQPEPTAGQQ
PGLHQLRAFEQLLNEHFRTHKAVRDYAAWLHLTPNHLNAVCRRLLAKTASNLIHERVVVE
AKRLLHHSALSVAEVAYNLGFDDASYFSRYFRKYAGLTPEAFRRLGR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgccgccgtaccggtactgtgcattgatgcttttccgcacacgccgccgcaa
acgccttttcggctgcaacggctcgaggagttgcgcgccagctttgccgacgtaaacgag
ccgcatgcccacgatttttacgtgctgctgtacttcacgcacggccacggcacccacacc
atcgactttgtaacctacgaggtgcggccgggcgccctgtttttcctggcgccggggcag
gtgcacagctggtcgttgtccgacgacacccgcggcatcgatatcttcttcgcgccggaa
ttttacttgctacgccacaccgccgagcggctttactcctaccccttcttcggccctcac
gggcagccggtgctgtacctgccgcccaacgagccgctaattggcccgctgctgtggcgc
atggagcaggagcatgccatgcccagcccaaaccagcaggaggtattgcgctcctacctg
catctggtgctcgaactggccgcccggcagcaccaacccgagcccacggcaggacagcag
cctggcttgcaccagctccgagccttcgagcagctgctgaacgagcacttccgcacgcac
aaagccgtgcgcgactatgccgcgtggctgcatcttacgcccaaccacctcaacgctgtg
tgccgccgcctgctggccaaaaccgccagcaacctaatacacgagcgcgtggtggttgaa
gccaaacgcctgctgcaccactcggccctttcggtagccgaggtagcctacaacctaggg
ttcgacgacgcttcgtacttctcgcggtacttccgcaagtatgcgggccttacgcccgaa
gccttccgccggctcggccgttga
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