Hydrogenibacillus sp. N12: K2M58_00020
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Entry
K2M58_00020 CDS
T07426
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hyi
Hydrogenibacillus sp. N12
Brite
KEGG Orthology (KO) [BR:
hyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyi03032
]
K2M58_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
hyi03400
]
K2M58_00020 (gyrB)
Enzymes [BR:
hyi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K2M58_00020 (gyrB)
DNA replication proteins [BR:
hyi03032
]
Prokaryotic type
DNA Topoisomerases
K2M58_00020 (gyrB)
DNA repair and recombination proteins [BR:
hyi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K2M58_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Sec66
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
QZA33028
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Position
3781..5700
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AA seq
639 aa
AA seq
DB search
MTSHDAGLRYTEADIQVLEGLDAVRRRPGMYIGSTNARGLHHLVWEIVDNSVDEAMNGHA
DRIEVTVHRDGRLTVVDNGRGIPVGIHPQTGKSTVETVLTVLHAGGKFGSGGYKVSGGLH
GVGISVVNALSLELEVEVKKDGGRYRQRYRRGVPQGPLERIGDVPPGETGTRVTILPDPE
IFKETVAFDADVLAERLEELAFLNRGVTFRLVDERTGRDETFVYAGGLAAFVERLAEGQT
ALTPPLHFEGAREKMEIEAALLYVDGDQTILRSYVNNIPTTEGGTHESGLKAALTRAIND
YARRGGILKDNEANFIGEDVREGLVAVLSLRLIEPQFEGQTKTRLGNSEARTQVEAFIYE
KLATYLEEHPTVARRIVEKALLAARAREAARRARELTRRKGALEITSLPGKLADCASRDP
EESELFIVEGDSAGGSAKLGRDRRTQAILPIRGKIINVEKARDEKVFANEEIRALVTAIG
TGIGEHLDLGKLRYHKIIIMTDADVDGSHIRTLLLTFFYRHMRPLIERGHIFIAQPPLYR
LQRGKTVRYAYDDAEMERIKRELGGRGEITIQRYKGLGEMNAEQLWETTMDPKARILLKV
ELTDAREAERVFELLMGERVEPRRQFIQEHAAFVRNLDV
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccacgatgccggccttcgttacaccgaagcggacattcaagtgctggaaggc
ctggacgccgtccggcggcgccccgggatgtacatcggttcgacgaatgcccgggggctc
caccacctcgtctgggagatcgtcgacaactccgtcgacgaggcgatgaacggccacgcc
gaccggatcgaggtgaccgtccaccgggacggccgcctcaccgtcgtcgacaacggccgc
ggcatcccggtcggcatccatccccagacgggaaagtccaccgtcgagacggtgctcacc
gtcctccacgccggcggcaaattcggaagcggcggttacaaggtgtccggcggcctgcac
ggcgtcggcatctccgtcgtcaacgcgctttcgctcgagctcgaggtcgaagtgaaaaaa
gacggcggccgctaccggcagcgctaccgccgcggcgtccctcaagggcccctcgagcgg
atcggcgacgtcccgccgggggagaccggcacccgggtgacgatcctcccggacccggag
attttcaaagagacggtcgccttcgacgccgacgtcctcgccgaacggctcgaggaactc
gcctttttgaaccgcggcgtcacgttccgcctcgtcgacgagcggaccggtcgggacgag
acgttcgtctacgccggcggcctggcggccttcgtcgagcgccttgcggaaggccagacg
gcgcttacgccgccgctccacttcgaaggcgccagggagaaaatggaaattgaagccgcc
ctcctgtacgtcgatggcgaccagacgatcctccgatcgtacgtaaacaacatcccgacg
accgaagggggcacccacgaaagcggcctcaaggccgccctcacccgggcgatcaacgat
tacgcccgccgcggggggattcttaaggacaacgaggcgaacttcatcggcgaagacgtc
cgggaagggctggtggcggtcttgagcctgcgcctcatcgagccgcagttcgaaggccag
acgaaaacccgcctcgggaacagcgaggctcggacccaagtcgaggccttcatctacgaa
aagctcgccacgtacctggaagaacacccgaccgtcgcccgccggatcgtggaaaaagcc
ctcctcgccgcccgggcccgggaggcggcccgccgggcccgggagctcacccggcggaaa
ggcgccctcgagatcacgagcctccccggaaagctcgccgactgcgcgagccgcgacccg
gaggaaagcgaactgtttatcgtcgagggcgactccgccggcggctccgcgaagctcggc
cgggaccgccggacccaagcgatccttcccatccggggaaagatcatcaacgtcgagaaa
gcccgggacgagaaggtgttcgccaacgaagagatccgcgccctcgtcacggcgatcggc
accggcatcggcgagcacctcgacctcggcaaactccgctaccacaagatcatcatcatg
accgacgccgacgtcgacggaagccacatccggacgcttctcctgacgtttttctaccgg
cacatgcggcccctcatcgagcgggggcacatcttcatcgcccagcccccgctctaccgg
ctgcagcgggggaagacggtccgctacgcctacgacgacgccgaaatggagcggatcaag
cgggagctcggaggccggggcgagatcacgattcagcgctataaagggttgggcgagatg
aacgccgaacagctctgggagacgacgatggacccgaaagcgcggattctcctcaaggtc
gagctcaccgacgcccgggaggcggagcgggtgtttgagctcctcatgggcgagcgggtc
gaaccccggaggcagttcatccaggaacacgccgccttcgtccggaacctggacgtgtaa
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