Hydrogenibacillus sp. N12: K2M58_01120
Help
Entry
K2M58_01120 CDS
T07426
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
hyi
Hydrogenibacillus sp. N12
Brite
KEGG Orthology (KO) [BR:
hyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyi03400
]
K2M58_01120
Enzymes [BR:
hyi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K2M58_01120
DNA repair and recombination proteins [BR:
hyi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
K2M58_01120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Nif11
Motif
Other DBs
NCBI-ProteinID:
QZA33198
LinkDB
All DBs
Position
205395..209216
Genome browser
AA seq
1273 aa
AA seq
DB search
MQVTVWRAATMRSAREGLYRRLIDASHREPDGAPLILLVPEQMTFAVERALVRRGLRGST
RLWVVSFTRLAWRVFQEAGGLARRPVTAIGELLLVAEAALRRREELGPFARTADRIGTLE
RLSAFLRELRRYGTPPEALRAAAQALASDPALQEKLAAAATVYADVDRALQSRYLAAEDA
LRGLAKRLSAPDPAKRPAWVAEAEVFVDGFLSFTPEELAVLDGLMARTRSVAFLFPDLRA
AAEVADPAARSVLRALGALYGDVERGLDGPVARTVAELERLAGRRGVPFQLAPAPDSAPG
SAPAAGAAHGGAAGAARGEAAGGAHGAAQAGAAAGPWAAAGPLPETRLFRPPTRRREVEG
AAAVLRHYRRRGIPYRRMAVVAGDLEAYAGIVEAVFAAADIPVFLDRERPMRPHPLVRLV
EALLEGMENGPSTPALIALLKTGLLGPFFEARGMTLTEDDIDRLENWLLEYGVQGSDWAK
PHFGRPPEVEAARDGGRPETAGRPAGPADGAREAGAAFAGGGPEGAGAALREKIREALAQ
ALFPDAEERTAAEPPTAGAWARRLWRRIEALDVEAGVRRSMFAAEGRGAVEEADEDRQAW
QTLIELLEQTADVLGETPMDAGTFARLFRFGLRSARFRLVPRTVEAVTVADLDRSRLLDV
DVIVFLGAVRGAMPPEGGDDGWLSEAERRRLFERLAEAEAPAVRLAPPLEERVAEAAVKL
WSFFAEAGRARAVFVPAAVGDEPATPAPWVEALEETSPPAAGRRIPPSLLSPTQGLQVLA
AGVRAFVRGALPPPAFWPLYAAYVALEKAGDPAGLSARGIAGLAAGRPERGRIAPELARR
LFPPPLIASVSKMERYHECPYAFYAAHGLALAERPVHRLTMPDVGELYHAALAAAGPALA
ALADRTKGAGGSWLSGGIPAEAEAALRAAVEAATAAALQQDRRALFSADARRKAIAHRLR
RHVERTARAAVEQLRRGAFRPHAFEFAVGDGRDGVPLRLPGGRVIRIRGRIDRIDLAPGK
AAPWLRIVDYKSRFVAPDARRFLAGVDLQLIVYLDLLLNEGLRIEGKRILPRPAAALYQI
VGDPRPIVKGSEGEAEIAHLVLKAYRLSGWIARDRDAVFCLDESLPERLRAIQEQKKEKK
SRRRTVDSAVLDLSLTLEGDLPAGSRGTALFLIPEAGWAALRAVAREKLEEAVVGIEAGR
YPAAPFAEPDGTPVCRFCPYQAVCGFDPEAGDRPRRFYSAGDARRVLAEIVHGRAAAAEA
AGRGVEAGQGGGM
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggtcacggtctggcgggcggcgacgatgcgatcggcgcgggaggggctctaccgg
cggctcatcgacgcctcgcaccgggagccggacggggcgccgctgattctcctcgtgccg
gaacagatgacgtttgccgtcgagcgggccctcgtccgccgggggctccggggctcgacg
cggctctgggtcgtgagttttacgcgcctggcgtggcgggtttttcaggaagcgggcggg
ctcgcccggcggccggtgacggcgatcggggagctcctcctcgtggcggaggcggccctt
cgccggcgggaggagcttggcccctttgcccggacggcggaccggatcgggacgctggaa
cggctgtccgccttcctccgggaactccgccgctacgggacgccgccggaggcgcttcgg
gcggcggcgcaggctctggcgtcggatccggcccttcaggaaaagctcgcggcggcggcg
accgtctacgccgacgtcgaccgggcgcttcagtcccgctatctcgcggcggaagacgcc
ttgcgggggctcgcgaagcggctttcggcgcccgatcccgcaaagcggccggcctgggtg
gccgaggccgaggtgttcgtcgacgggtttttgagctttacgccggaggagctggcggtg
ctggacgggctcatggcccggacgcggtcggtggcgtttttgttccccgaccttcgggcg
gcggcggaggtcgccgatccggcggcccggtcggtcctccgggccctcggcgcgctgtac
ggcgacgtcgaacgggggctcgacggcccggtggcgcggacggtggcggaactcgagcgg
ctcgccgggcggcggggcgtgccctttcagctcgcgccggcgccggattcggcgcccgga
tcggctccggcggccggcgcggcccacggcggggcggccggggcggcccgcggagaggcg
gccggcggagcgcacggggcggcccaggcgggggcggcggccggcccctgggcggcggcg
ggcccgcttccggagacgcgcctttttcgcccgccgacgcggcggcgggaggtggagggg
gcggcggcggtcctccggcactaccgccggcgggggatcccgtaccggcggatggccgtc
gtcgccggcgatctcgaggcgtacgccggcatcgtcgaggcggtcttcgccgcggcggac
atcccggtgttcctcgaccgggagcggccgatgcggccgcacccgctcgtccggctcgtc
gaggcgctcctcgaggggatggaaaacggcccgtcgaccccggcgctcatcgcgctcctt
aagacggggcttctcgggccgttttttgaagcccggggcatgacgctcacggaagacgac
atcgatcggctggagaactggctcctcgagtacggcgtgcagggaagcgactgggcgaag
ccgcatttcggccggccgcctgaggtcgaggcggcgagggacggcgggcggccggagacg
gcgggacgtccggcgggcccggccgatggggcgcgggaagccggagccgctttcgccggc
ggcgggccggaaggggccggggcggcgctccgggaaaagatccgggaagccctcgcccag
gccctttttcccgatgcggaggaaaggacggcggccgagccgccgacggccggggcgtgg
gcccggcggctctggcggcggatcgaggcgctggacgtcgaggcgggggtgcgccggtcg
atgttcgccgccgaggggcggggggcggtcgaggaggcggacgaagaccggcaggcctgg
cagacgctgatcgagctcctcgagcagacggcggacgtcctcggcgagacgccgatggac
gccgggacgtttgcccgccttttccgcttcgggctgcgctcggcgcggtttcgcctcgtg
ccccggacggtggaggcggtgacggtggcggacctcgaccgctctcgcctcctcgacgtc
gacgtcatcgtcttcctcggcgccgtccggggggcgatgccgccggaaggcggcgacgac
ggctggctttcggaggcggagcggcgccggctcttcgagcggctcgccgaggcggaggcg
ccggccgtgcgtctcgcgccgccgctcgaggagcgggtcgcggaggcggcggtgaagctc
tggagcttcttcgccgaggccgggcgcgcccgcgccgtcttcgtcccggcggcggtcggc
gacgagccggcgacgccggcgccgtgggtcgaggcgctggaggagacgtcgccgccggcc
gcgggtcgccggatcccgccgtccctcctttccccgacgcaggggcttcaggttctggcc
gccggcgtgcgggcctttgtccggggcgccctgccgccgccggccttctggccgctttat
gccgcttacgtcgccctggagaaggcgggcgatccggccggcctttccgcccgggggatc
gccgggctcgccgccggccggccggagcgggggcgcattgcgcccgagctcgcccggcgg
ctctttccgccgcctctcatcgcgagcgtgtcgaagatggagcggtaccacgaatgcccg
tacgccttttacgccgcccacgggctcgccctcgccgagcggccggtgcaccggctgacg
atgcccgacgtcggggagctctatcacgcggcgctcgccgccgccgggccggccctcgcg
gcgctggccgaccggacgaaaggggcgggcgggtcgtggctttccggcgggatccccgcc
gaggccgaggcggcgctccgggcggcggtcgaggcggcgacggcggcggccctgcaacag
gatcgccgggccctcttttcggccgacgcccgccggaaggcgatcgcccaccggctccgg
cggcacgtcgaacggacggcccgggcggcggtggagcagcttcggcggggggcgtttcgg
ccgcacgcctttgaattcgccgtcggcgacggccgggacggggtgccgcttcggcttccc
ggcggccgggtcatccggatccgcggccggatcgaccggatcgacctcgccccggggaag
gcggcgccctggctccggatcgtcgattacaagtcccgctttgtggcgccggacgcccgg
cggtttctggccggcgtcgatctccagctcatcgtctacctcgatcttcttttgaacgaa
ggcctccggatcgaagggaagcggatcctgccgcggccggcggcggccctctaccagatc
gtcggcgatccccggccgatcgtgaaagggtcggagggggaggcggagatcgcgcatctc
gtgctcaaagcgtatcgcctaagcggctggatcgcccgggaccgggacgccgtcttctgc
ctggacgaaagcctgccggagcggctgcgggcgattcaggagcagaagaaagagaaaaaa
tcccggcgccgcaccgtcgacagcgcggttctcgatctttcgcttacgctggagggggac
ctgccggcgggcagccgggggacggccctcttcctcatcccggaggccggctgggcggcc
cttcgggcggtggcccgggaaaagctggaggaggcggtggtcgggatcgaggcggggcgg
tatccggcggcgcccttcgccgagccggacgggactcccgtctgccgcttctgcccgtac
caggcggtctgcggcttcgatccggaggcgggcgaccggccccggcggttttattcggcc
ggcgacgcccggcgggtgctggcggagatcgtgcacggccgggcggccgcggcggaggcg
gcgggccggggcgttgaagccgggcaagggggtggaatgtga
DBGET
integrated database retrieval system
