Hydrogenibacillus sp. N12: K2M58_01125
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Entry
K2M58_01125 CDS
T07426
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hyi
Hydrogenibacillus sp. N12
Brite
KEGG Orthology (KO) [BR:
hyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyi03400
]
K2M58_01125
Enzymes [BR:
hyi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K2M58_01125
DNA repair and recombination proteins [BR:
hyi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
K2M58_01125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
DUF465
GAPES4
Motif
Other DBs
NCBI-ProteinID:
QZA33199
LinkDB
All DBs
Position
209216..214273
Genome browser
AA seq
1685 aa
AA seq
DB search
MGASPGAGGVRWTPEQRLAIGVRHDEMLVAAAAGSGKTAVLIERIVRLVAGDDAGPGGAG
EAAGSGGQETFGEAGAEAPGGLMAAAASGSPGGSGPFGEAGATASGVAGAAASGELGTTA
SGKAGAAASGEIGAKAPMPDKAGFGRRTSLDRLLVLTFTRAAAEEMRSRLARALLERART
RPGDPHLRRQLLLLPQAEVTTFDAYALRVVRRFAHLIGWDPSFRLIDEIEERPLRQAAVE
ATLAWAYGTKAPDDPFYRLVDWLHATRDDGPLVEALFRLDDFVRSLPDPDAFFAAGLEAY
AGAAAGATAGRWFLAFRRTMTEALEGLVRDLRGLVGQARAVSAKAAEPFAEDAAAAEAAL
EAVRAAEGWDDVVAALRGFFARPLARVSVRGLSPEAGAAVERLKRERAALRDQLKDRLTP
ALVPAEEAAEEAAAARPVLEALVGLYREYADRLEAIKGRENVRTFSDVARALLRVLEAGA
LEAVAAQYDEVLVDEYQDTNRLQDAFVARLSARGVRVFMVGDVKQSIYRFRLSEPRLFQE
KYERFRPIAAPPAEGPADGGAAAVGPADGAVAAPPAEGAPDGGGAALSAADAPGGGATAL
SAEGAPAGGSWALSSEGPADGGGAAASAAGPAPEAAAAVGAARDAAAGSGEAKSRVRIDL
NRNFRSKPEILRFINALFERLMVKEAAEIDYDAAAALRPGKEAPPDPEAVPEWTILDVRP
GAAEPPSAAADGEGGEATGAGAGGGSAGAPDDGAGPDAAGAPAGPAPEADGAFGEEAAPE
EEEEAPEGAEAEGRWIARRIRELVAAGRSYREIAVLLPTMRGAGDVYARALREAGIPAVV
DQRSGLFEAIDLKRIVALLQLLDNGAQDIPLAAVLTAPFGGFTDAELAEIRAAYPDRPFH
RAVRALVRLAALREKETAGEAKGAGAEAAGAGAARAGAAGSEAVAADAAGARPDGAAPGA
EEAAALPDEAEPDAEATAGSDAQTPGDGPAVSPALLAKLLRFFRRLQTWRRLSRRLSPEA
LLDRLYADTGYPAYVLGLPEGELRRERLFALRDLAARYAEHGLGGLSGFLRELERLQESG
ADDVLRIADGEEDRVRIMTVHRSKGLEFPVVFLAGLGRGQNREDERESLLLHGELGFALR
RVDLDLGVERVEAVYRFLLQERLRRERGAEAIRLLYVGLTRAKERLILVSAVRDAAQTFG
LRSPKSSRGRLIDLPPRSGIRLSDRPVHRLYFALEAALRERGGVFGGGFREVLDRARKSP
DEAILVTLPDGFGRTAAFRLRVVPADALVGAPAEGSGAPGRALVGAKGETPAESPGGTPS
EAPGTGDMRPPASGAFDEAVERAVPSGAPGIGVERAMPSGASGPGAESARDRVPDADRIL
AEAVAAFRLPDPPALAALFPRPERVAKAGEALLRAMRLPDAGAAYPTKLSVTELKRRLEA
PDPLARPLVAPFRLRRPRFSGAALTPEAIGSAVHRVLQSLDFGGPPSIEAVEATIRRLVE
GEALLPEEAEAVDRAAIVRFWTSPLGVRLARAARTGTLRREVSFLYALSPQALWEERAGT
GGADAEGAVFLDKGSAVLSAPAGAVRTAAGPDGEAEPIVVQGTIDALFEEDGGLVLLDYK
TDRTDRSAPTGAGDRSARHPPSEEALRKRHALQLRLYARAIEAIWGVPVRERWIVYLDRD
EPVRV
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcatctccgggcgcgggaggggttcgctggacgccggagcagcggcttgcgatc
ggcgtccggcacgacgagatgctcgtcgccgccgccgccggctcggggaagacggcggtc
ctcatcgagcggatcgtccgcctcgtcgccggcgacgacgcgggcccgggcggcgccggc
gaggcggcggggtccggcgggcaggagaccttcggcgaggccggtgcggaagcccccggc
ggactcatggcggcggccgcctccggcagccccggcggttcggggccgttcggcgaggcc
ggcgcgacggcgtccggcgtggctggtgcagcggcgtccggcgagctcggtacgacggcg
tccggaaaggccggtgcggcggcgtccggcgagatcggcgcgaaagccccgatgccggac
aaggcgggctttggtcgccggacgtccctcgaccggctgctcgtcctcacgttcacccgg
gcggcggcggaggagatgcgaagccgcctcgcccgggcgcttctcgagcgggcccggacc
cgcccgggcgatccccatctccggcgtcagcttctccttttgccccaggcggaagtgacg
acgttcgacgcctacgcgctccgggtcgtccggcgcttcgcccacctcatcggctgggat
ccgtcgtttcggctcatcgacgagatcgaggagcggccgcttcggcaggcggcggttgag
gcgacgctcgcctgggcgtacgggacgaaggcgccggacgatccgttttaccggctcgtc
gactggctgcacgccacccgggacgacgggccgctcgtcgaggcgctctttcggctggac
gacttcgtccgctcgctgccggacccggacgcgttttttgccgcgggcctcgaggcttac
gccggggcggccgccggcgcgacggcgggccggtggtttttggccttccggcggacgatg
accgaggcgctcgaagggctggtccgggatcttcgggggctcgtcggacaggcccgggcg
gtgtcggccaaggcggcggagccgttcgcggaagacgccgccgccgcggaggcggcgctc
gaggcggtgcgggcggccgaaggctgggacgacgtcgtcgccgccctgcgggggtttttc
gcccgcccgctcgcccgggtgtcggttcgggggctttcgccggaggccggggcggccgtc
gagcggctcaagcgggagcgggcggcgcttcgggatcagctgaaggatcgcctcaccccc
gccctcgtcccggcggaggaggcggccgaagaggcggccgccgcccgaccggtcctcgag
gcgctcgtcggcctgtaccgggagtacgcggaccggcttgaggcgatcaaggggcgggag
aacgtccggacgttttccgacgtcgcccgggcgctccttcgggtgctcgaggccggggcc
ctcgaggcggtcgcggcgcagtacgacgaggtgctcgtcgacgagtatcaggatacgaac
cggctgcaggatgcgtttgtcgcccggctttctgcccgcggcgtgcgggtgtttatggtc
ggggacgtcaagcaaagcatctaccgcttccggctgagcgagccgcggctctttcaggag
aaatacgagcgcttccgtccgatcgcggcgcctccggcggaggggccggccgacggcggg
gccgcggcggttggcccggccgatggcgcggttgcggcgcctccggcggagggagcgccc
gacggcgggggcgcggcactttcggcggcggatgcgccgggcggcggggctacggcgctt
tcggcggagggagcgcccgccggcgggtcttgggccctttcgtcggaggggccggccgac
ggcgggggcgcggcggcttcggcggccggaccggccccggaggcggccgccgcggtcggc
gcggcgcgggacgccgccgcggggtccggggaggccaaaagccgcgttcgcatcgatctt
aaccgaaattttcgcagcaagccggagatcttgcgcttcatcaacgccctcttcgagcgc
ctcatggtgaaggaggcggcggagatcgactacgacgccgccgcggccctgaggccgggg
aaggaggcgccgccggatccggaggcggtgccggaatggacgatcctcgacgttcggccg
ggcgcggcggagccgccttccgccgcggcggacggcgaaggcggtgaggcgacgggcgcc
ggcgcgggaggcgggagcgccggggcgcccgatgacggggccgggccggatgcggccggg
gctccggccggcccggcgccggaggcggacggcgctttcggcgaagaggcggcgccggaa
gaagaggaagaggcgccggagggggccgaagcggaaggacggtggatcgcccggcgcatc
cgggagctcgtcgcggcgggccggtcgtaccgggagatcgccgtccttttgccgacgatg
agaggcgccggcgacgtctacgcccgggcgctccgggaagcgggcatcccggcggtcgtc
gaccagcgttccgggctgtttgaggcgatcgatttgaagcggatcgtggccctcctccag
cttctcgacaacggcgcgcaggacatcccgctcgcggcggtgctcacggcgccgttcggc
ggctttaccgatgcggagctcgcggagatccgggcggcgtatccggaccggccgtttcat
cgggcggtgcgggcgctcgtccggctggccgcgcttcgggagaaagagacggccggcgaa
gcgaagggggccggagcggaagcggccggagcgggagcggcccgggcgggggcggccggg
tcagaagcggtcgctgcggatgcggccggggcccgtccggatggggcggcgcccggggcg
gaagaagcggcggccctgccggatgaagcggaacccgacgcggaagcgacggccgggtcc
gatgcgcagacgccgggcgatgggccggcggtgtctccggcgcttcttgcgaagctcctt
cgcttctttcggcggcttcagacgtggcggcggctttcccggcggctttcgccggaggcg
cttttggaccgtctgtatgccgacaccggctatccggcgtacgtcctgggccttccggaa
ggggaacttcggcgggagcggctctttgccctccgggacctcgccgcccggtacgccgaa
cacggcctcggggggctttcgggctttctccgggaactcgagcggcttcaggaaagcggc
gccgacgacgtgctccggatcgccgacggcgaggaggaccgggtgcggatcatgaccgtc
caccggagcaaggggctcgagtttccggtcgtcttcctcgccgggctcggccgcgggcag
aaccgggaggacgagcgggagtcgctccttttgcacggcgagctcggcttcgccctccgg
cgggtcgacctggacctcggcgtcgagcgggtcgaggcggtgtaccgcttccttcttcag
gaacgcctgaggcgggagcgcggggcggaagccatccgcctcctctacgtcggcctgacc
cgggcgaaggagcggctcatcctcgtgagcgccgtccgggacgccgcccagacgttcggg
ctccggtcgccgaagtcgtcgcgggggcggctcatcgaccttccgccccgttcgggcatc
cgcctgagcgatcgccccgtgcaccggctgtatttcgccctcgaggcggcgctccgggag
cgcggcggggtcttcggcggcgggttccgggaggtcctcgaccgggcgaggaagtcgccg
gacgaggcgatcctcgtcaccctgccggacggcttcggccggacggcggccttccgcctg
cgcgtcgtgccggcggacgccctcgtcggggcgccggccgaaggatcgggggcgcccggc
cgcgccctggtcggcgccaaaggcgagacgccagccgaaagccccggggggacgccgtcg
gaggcgcccggtaccggcgacatgcggccccctgcttccggcgctttcgatgaggcggtc
gaaagggcggttccgtccggcgcgcccggcatcggggtcgagcgggcgatgccgtccggc
gcctccgggccgggagcggaaagcgcccgcgatcgggtgccggacgccgaccggatcctg
gccgaggcggtcgcggccttccgactgccggacccgccggccctggcggccctgtttccc
cggccggaacgggtggcgaaggcgggggaggcgctgcttcgggcgatgcgccttccggac
gccggcgcggcgtatccgacgaagctttccgtgacggagctcaagcggcggctcgaggcg
ccggatccgctggcgcggcccctcgtggcgcccttccgcctccggcggccgcggttttcg
ggggcggccctcacgccggaggcgatcgggtcggcggtgcaccgggtgctgcagtcgctc
gatttcggcgggccgccgtcgatcgaggcggtcgaggcgacgatccgccgcctcgtcgag
ggggaggccctgctgccggaggaggcggaagcggtcgaccgggcggcgatcgtccgcttc
tggacgtcgcccctcggggtgcggctcgcccgggcggcccggacggggacgctccggcgg
gaggtgtcgttcctctacgcgctgtcgccccaggcgctctgggaagaacgggccggaacc
gggggagcggacgcggaaggggcggtctttttggacaaagggagcgcggttctctcggcc
ccggcgggcgcggttcggacggcggccggcccggacggcgaggcggaaccgatcgtcgtc
caggggacgatcgacgccctgtttgaagaggacggggggctcgtcctcctcgattacaaa
accgaccggaccgaccggtccgccccgaccggcgccggcgaccggtccgcccgccatccg
ccttccgaagaagcgctccggaagcggcacgcgcttcagcttcggctctacgcccgggcg
atcgaggccatctggggggttccggttcgggagcggtggatcgtctacctcgatcgggac
gagccggtgcgggtgtag
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