Hydrogenibacillus sp. N12: K2M58_01395
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Entry
K2M58_01395 CDS
T07426
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hyi
Hydrogenibacillus sp. N12
Brite
KEGG Orthology (KO) [BR:
hyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyi03400
]
K2M58_01395
DNA repair and recombination proteins [BR:
hyi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K2M58_01395
Archaeal homologous recombinant proteins
K2M58_01395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QZA33246
LinkDB
All DBs
Position
291991..295950
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AA seq
1319 aa
AA seq
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MRPLRLEFEGLHSYREKAIIDFRPLTRAGLFGIFGPTGSGKSTILDAITLALYGTVVRAE
RGTSGILNVDADGLAVAFDFALAGTAYRVERRYRRPSGRGERLDGERKEAGDGASFGLKN
ESARLLRLKGPAPEEAVPLEVLAEKPREVDRAVVRLIGLTGDDFTRAVVLPQGRFHEFLT
LKGKDRREMLERILNLERYGKALYERVNARARALESEREVKAAERIGLGDASREALEAAK
AAHARAEAERAAAEGRLQALRAEVEALRKVRELQEKEAELEAALRRHRARAPEIEAMREA
LRQAEAAAHLRPYAEALVREADRLQAAFRVREAARAKAAEAASRLEQAEADLAARRERAE
ALRPDLLRQAERYRMAEARAARLLALEAEIAEDKRKRDLAAAETAAHERTLMRLKAEEAA
KKERIRALKAEVERLALPEERRKRLDDAWQAAVRLRQAEEAAEAGSTRAAEAREAAAREI
GAAASSFERLARAVSDGRARVAAAEGRLAVAASLWADALPKLSAALEKAEEVVRLRHKAA
ERDGLIRELASHLVDGIPCPVCGSSHHPAPAHLRPEAAHGAGATAAFAAEVGELGKVWLV
VRSTLQARSEALSASRAAVADRLASAEKSLAEGKRLLAAGPGSPDGGATALEPGAAPDPA
SSGAPGAAPNLAPEAVREALAESLENLAESAAAIPEAEKGATPETFGDRPGTPDGRGEAA
ARAEAAVRAALSAVERLALDSTAPFGPGEAPSLNPGAASSLGPEATGPLTGEAPGTAEAD
ALRELRAAVEALGAFAEDLDAARRGLEAFVRTLDAEEKAFALRLEAARRARDGAARAEEE
AREKAQARKAAAEAYAARFPDLPWSDVDRLREAAFRQAREAEAHRQALEQAMAELEQLRK
AQTEAQAVLEAAGAALARHEAELRAREVQAGELKRELSVLTGGRPPEGLRQAVEAELQAL
DEAVRRAEAAVAAAREAHRATEKEFSSAESALQETRHRLEQAKAAWDNVRPEFEAIDAGF
ADPKAALQAVRDEREMAFLRHELDGYAREGAALEARRAEVAAALEAAFRDVQPAAVLREN
SFRAGTSPAVPGGRLPSAVFEAAEAALREQEVAVQRATERVGEAAEKLAALQARHARYLA
LTAELERLEKAVVLHKQLLKALEGRAFVEYLAREELVALSRAASERLQGLTGGRLSLEVD
SESNFVVRDYLRGGRLRPVSSLSGGETFLASLALALALSYAVQLKGTDPLEFFFLDEGFG
TLDPEALEVVIGTLMRLSSERMAVGVITHVPAFRERIPYRLIVEPADETRGSRVRFEVM
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgcttcggctggaatttgaaggtttgcacagctaccgggaaaaggcgatcatc
gattttcggccgctcactcgggcggggcttttcggcattttcggcccgacggggagcggc
aaatcgacgattctcgacgccatcaccctcgccctgtacgggaccgtcgtccgggcggag
cgggggacatccggcattttgaacgtcgacgccgacgggcttgccgtcgccttcgacttc
gccctcgccggcaccgcctaccgcgtcgagcgccgctaccgccggccttcggggcgcggg
gagcgcctcgacggagagcggaaagaggcgggagacggagcctcctttggcttgaaaaac
gaaagcgcccgcctcctccgcctgaaggggccggcgccggaggaagcggtcccgctcgag
gtgctggcggaaaagccgcgggaggtcgatcgggccgtcgtgcggctgatcgggctgacg
ggtgacgattttacccgggcggtggtgctgccgcaggggcggtttcacgaatttttgacc
ctcaagggcaaagaccggcgggagatgctcgagcgcatcctgaacctggaacggtacggg
aaagcgctttacgaacgggtcaacgcccgggctcgggcgctcgagtcggagcgggaggtc
aaagcggcggagcggatcggcctcggcgacgcgtcccgggaggcgctggaggcggcgaag
gcggcccatgcccgggcggaagccgagcgggcggcggcggaagggcggcttcaggcgctc
cgggcggaggtcgaggcgctgcggaaggtccgggagctccaggaaaaagaagcggagctc
gaggcggcccttcggcggcaccgggcccgggcgccggagatcgaagccatgcgggaagcg
cttcgccaggcggaggcggcggcccatctccggccgtacgccgaggcgctggttcgagaa
gcggaccggcttcaggccgccttccgcgtccgggaggcagcgcgggcgaaggcggccgag
gcggcctcccggctcgagcaggcggaggccgatctcgctgcccgccgcgagcgggcggag
gcgctccggccggaccttctccggcaggcggagcggtatcggatggccgaagcccgggcg
gcccggcttcttgcgctggaggcggagatcgccgaggacaaacggaagcgggatctggcg
gccgccgaaacggcggcccatgagcggacgctcatgcgtctcaaagccgaggaggcggcg
aaaaaagagcggatccgggcgctgaaggcggaggtcgagcggcttgcgcttccggaggag
cggcgaaagcggctcgatgacgcctggcaggcggccgtgcggctccggcaggcggaagag
gcggccgaggcgggttcgacgcgggcggcggaggcccgggaggctgccgcccgggagatc
ggggcggccgcctcgagctttgagcggctggcccgggcggtaagcgacggtcgggcgcgg
gtcgccgcggcggaggggcgccttgcggtcgccgcgtccctttgggccgacgcccttccg
aagctttcggcggcccttgaaaaggcggaggaggtcgtgcggctccggcataaagcggcg
gagcgggacggtctcatccgggaactcgcgtcgcacctcgtcgacggcatcccgtgcccg
gtctgcggctcttcgcaccatccggccccggcccacctccggccggaggccgcgcatggg
gccggggcgacggcggcgttcgcggcggaggtcggcgagctcggaaaggtatggctcgtc
gtccgaagcacccttcaggcgcgaagcgaggcgctttccgcaagccgcgcggcggtcgcc
gatcggctggcctccgcggagaagtcgctggccgaagggaagcggcttctcgccgcaggg
ccgggttcccccgacggaggggcgacggcgcttgagccgggcgcggcgccggatccggcg
tcttccggggcgccgggcgcggcgccgaacctcgcgccggaggccgtccgggaagctttg
gcggagtcgctggagaatttagcggagtcggcggcggcgatccccgaagcggaaaaaggc
gcgacgccggagacgttcggggatcggccggggacgcccgacggccggggcgaggcggcc
gcccgggcggaagcggcggtgcgggctgccctttcggccgtggaacggctcgccctcgat
tcgaccgcgccttttggaccgggtgaagccccgtccttgaacccgggtgcggcctcctcc
ctcggtccggaggcgacggggcccctcaccggggaagcgccgggcaccgccgaggcggat
gcgttgcgagagcttcgggcggcggtcgaggcgctgggggcgttcgccgaagatctggat
gccgcgcgtcgggggctggaggcgttcgtccggacgcttgacgcggaagaaaaagcgttt
gccctgcggctggaggcggcgcggcgcgcccgggacggggccgcccgggcggaagaagaa
gcccgggagaaagcccaagcccggaaggcggcggccgaagcgtatgcggcccgctttccc
gacttgccgtggtcggacgtcgaccggcttcgggaagcggccttccggcaggcccgggag
gccgaggcgcaccggcaagcgctcgagcaggcgatggccgagctcgagcaactccgtaag
gcgcagacggaggcgcaggcggtcctggaggcggccggggcggccctcgcccgccacgag
gcagagcttcgggcgcgggaggtgcaggccggagaactgaaacgggagctttcggtcctc
accggcggccgcccgccggaaggacttcgtcaggcggtggaagccgagcttcaggccctc
gacgaggcggtccggcgggcggaagcggcggtggcggcggcccgggaggcgcatcgggcg
accgaaaaggaattttcgtccgccgaaagcgcccttcaggagacccggcatcgtctggag
caggcgaaggctgcctgggacaacgtccggccggagttcgaagcgatcgatgccggtttt
gccgatccgaaggcggcgcttcaggccgtgcgagacgaacgggagatggcgttccttcgg
cacgagctcgacggctacgcccgggaaggggcggcgctcgaagcccggcgggcggaagtg
gcggcggcgctcgaggcggcgtttcgcgacgtccagcccgcggccgtccttcgcgagaat
tcgtttcgcgccgggacatcgccggccgtccccggcggccggctcccgtcggcggtcttc
gaagcggccgaggcggccctgcgggagcaggaggtggccgttcagagggccacggaacgg
gtcggggaggcggcggaaaagctcgccgcgcttcaggcccgccacgcgcgctacctcgcc
ctgaccgccgagctggagcggctggagaaggcggtcgtccttcacaagcagctcttgaaa
gcgctcgagggacgggcgttcgtcgagtacctcgcccgggaggagctcgtcgccttgagc
cgggccgcttccgaacggctccaggggctgaccggcgggcgactttcgctggaggtcgac
tccgagtccaatttcgtcgtccgggactatttgcggggcggccgcctccggccggtgtcc
tccttgtccggcggagagacgtttctcgcttcgctggcgctggcgctggcgctctcgtac
gccgttcagctgaaggggacggatccgctcgagtttttctttctcgatgagggcttcggc
accctcgatccggaggcgctcgaggtcgtcatcgggacgctcatgcggctttcgtcggag
cggatggcggtcggcgtcatcacccacgtgccggcgtttcgggagcgcatcccgtaccgg
ctcatcgtcgagccggcggacgagacgcgcggttcgcgggtgcgctttgaagtgatgtga
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