Hydrogenibacillus sp. N12: K2M58_01935
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Entry
K2M58_01935 CDS
T07426
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
hyi
Hydrogenibacillus sp. N12
Brite
KEGG Orthology (KO) [BR:
hyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyi03009
]
K2M58_01935
Enzymes [BR:
hyi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
K2M58_01935
Ribosome biogenesis [BR:
hyi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
K2M58_01935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF5818
Motif
Other DBs
NCBI-ProteinID:
QZA33345
LinkDB
All DBs
Position
424869..425603
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AA seq
244 aa
AA seq
DB search
MRLDKLLAHMGYGTRREVKKLIKSGAVEVNGAVPPSPDVHVDPAADRVTVFEEPVRYVAH
VVYMLNKPPGVVSATVDRRQETVLDLVPAELWRPGLFPVGRLDKDARGLLLITDDGQLGH
RLAAPRWAVEKTYVVEVDGVLTEADVRRFAAGMVLDDGTRLRPATLEIVARGPRSMARVT
VTEGKYHQVKRMFLAVGKAVVDLKRIRIGPIVLDPKLPEGAVRPLTPEEGAALRAVVGLE
EKRR
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctcgataagctgctcgcccacatgggatacggcacgcgccgcgaagtgaaaaag
ctgatcaaaagtggggcggttgaggtcaacggcgccgtgccgccgtctccggacgtccac
gtcgatccggcggcggatcgggtgacggtctttgaggagccggtccgctacgttgcgcac
gtcgtctacatgctgaacaaaccgccgggggtggtgagtgccaccgtcgaccggcgccag
gagacggtgctcgatctcgtgccggcggagctttggcggccgggccttttccccgtcggc
cggctggacaaagacgcccgcggcctgcttctgatcaccgacgacggccagctcggtcac
cggctggccgccccccgctgggcggtggaaaagacgtacgtcgtcgaagtcgacggcgtt
ctcaccgaggcagacgtccggcggtttgccgccgggatggtgctggacgacgggacgcgc
cttcggccggcgacgctcgagatcgtcgccagaggcccccgatcgatggcccgggtgacg
gtgaccgaagggaagtaccatcaggtcaagcggatgtttcttgccgtcgggaaggcggtc
gtcgacctgaagcgcatccgcatcgggccgatcgtcctcgatccgaaactcccggagggc
gccgtccgccccctcacgccggaagaaggggcggcgcttcgggcggtggtcggcctcgag
gagaagaggcggtag
DBGET
integrated database retrieval system
