Hydrogenibacillus sp. N12: K2M58_04105
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Entry
K2M58_04105 CDS
T07426
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hyi
Hydrogenibacillus sp. N12
Pathway
hyi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K2M58_04105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyi03019
]
K2M58_04105
03016 Transfer RNA biogenesis [BR:
hyi03016
]
K2M58_04105
Enzymes [BR:
hyi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K2M58_04105
Messenger RNA biogenesis [BR:
hyi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K2M58_04105
Transfer RNA biogenesis [BR:
hyi03016
]
Prokaryotic type
tRNA degradation factors
K2M58_04105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QZA33713
LinkDB
All DBs
Position
882625..884838
Genome browser
AA seq
737 aa
AA seq
DB search
MAVYEVDIAGKKMSFDIGTYAKQASGAVFVRFGDTAVLCTATVSKEPKDVDFFPLTVNYE
ERLYAVGKIPGGFIKREGRPSDKAILTSRLIDRPIRPLFPDGFRHEVQVVDLVLSVDQNF
SPEIAAMNGTSLALMISEIPFQGPIGAVIVGRVDGRFVINPSVEEQEKSDLHLVVAGTKD
AITMVEAGARFVKEEEIVEAIAFAHRYIRELCLFQERVAAEVAKPKLTVEAKALDPTLVD
DVRNIARERLLEAIRTPDKSGREAAIEAVFQDVLAFYDELWAEEVPDAAERELRLKDVRA
ALETTLKEEVRRMIVHDGVRPDGRGLDEIRPITTAVGVLARTHGSAVFTRGQTQVLSVCT
LGPLSDAQILDDLGLEDEKRFMHHYNFPPFSTGEARPLRAPSRREIGHGALGERALEPVI
PSEKEFPYTIRLTSEVLESNGSTSQASICASSMALMDAGVPIKAPVAGIAMGLIMEGDRY
AVLTDIQGMEDHLGDMDFKVAGTADGVTALQMDIKIAGITVDIMREALLQARRARLFILE
KMREAIAEPRPTLSPYAPKILTMKIDPEKIREVIGPGGRVINRIIEETGTEIDIEQDGTI
YIASPDPEKNARAKELIENIVREVVVGETYLGTVKRIEKFGAFVEVLPGKEGLVHISQLA
PTRVNRVEDVVKVGDTILVKVIEIDEYGRVNLSRKAVITDQGGPGAGDAASGGSGGAGGR
PPGPAPRPTPKPKYKAK
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctacgaagtcgacatcgccggaaaaaagatgtcgttcgacatcggcacatac
gccaaacaggcgagcggtgccgtcttcgtccgcttcggcgataccgccgtcctctgcacg
gcaacggtgtcgaaggagccgaaggacgtcgacttctttccgctcacggtcaactacgag
gaacggctgtacgcggtcggaaagatccccggcggattcatcaagcgggaaggccggccg
agcgacaaggcgatcctgacgagccggctcatcgatcgtccgatccggccgctcttcccg
gacggcttccggcatgaggtgcaggtcgtcgatctcgtcctttcggtcgatcagaacttt
tcgccggagatcgcggcgatgaacgggacgtcgctcgcgctcatgatctccgaaatcccc
tttcaggggccgatcggggccgtcatcgtcggccgggtggacggccgcttcgtcatcaac
ccgtcggtggaagagcaggaaaaaagcgaccttcacctcgttgtggccgggacgaaggac
gccatcacgatggtggaggccggcgcccgcttcgtgaaggaagaggagatcgtcgaagcg
atcgcctttgcccaccggtacatccgggagctctgcctctttcaggagcgggtggcggcg
gaggtcgccaagccgaagcttaccgtcgaggccaaggccctcgatccgactctcgtcgac
gatgtgcggaacatcgcccgggagcggcttctcgaggcgatccggacgccggacaaaagc
ggacgggaggcggcgatcgaagccgtctttcaggacgttctggcgttttacgacgagctg
tgggccgaggaggtcccggatgcggccgagcgggagcttcgcctcaaagacgtgcgggcg
gccctagagacgaccttaaaggaagaagtgcggcggatgatcgtccacgacggcgtccga
cccgacgggcggggcctcgacgagattcggccgatcacgacggcggtcggcgtcctcgcc
cgcacccacggttcggcggtgttcacccgcggccagacgcaggtgctgtcggtctgcacc
ctagggccgctgtcggacgcccagatcctggacgaccttggtctggaagatgagaagcgc
tttatgcaccactacaactttccgccgttcagcacgggggaggcccggccgcttcgggcg
ccgagccggcgggagatcggccacggagccctcggagagcgggcgctggagccggtcatc
ccgagcgaaaaagaattcccgtacacgatccgtctgacgtcggaagtgctcgagtcgaac
ggctcgacctcccaggcgagcatctgcgcttcgtcgatggccctcatggacgccggcgtg
ccgatcaaggcgccggtcgccggcatcgcgatggggctcatcatggaaggcgaccgctac
gcggtgctcaccgacatccaggggatggaagatcaccttggcgacatggacttcaaggtt
gccgggacggccgacggcgtgacggcgctccagatggacatcaagatcgccggcatcacc
gtcgacatcatgcgagaagcgcttcttcaggcccggcgggcccgcctcttcatcctcgaa
aagatgcgggaggcgatcgccgagccgcggccgacgctgtcgccgtacgcgccgaagatc
ctcacgatgaagatcgatccggagaagatccgggaagtcatcggccccggcggacgggtg
atcaaccggatcatcgaagagacgggaaccgagatcgacatcgagcaggacgggacgatc
tacatcgcttcgccggatccggagaaaaacgcccgggcgaaggagctcatcgaaaacatc
gtccgggaggtcgtcgtcggcgagacgtacctcggcaccgtcaagcgcattgaaaagttc
ggtgccttcgtcgaagtgctccccggcaaggaaggcctcgtccacatttcacagctcgcc
ccgacgcgggtgaaccgcgtcgaggacgtcgtcaaagtgggcgatacgattctcgtcaag
gtgatcgagatcgacgagtacgggcgggtcaacctctcccgcaaggcggtgatcacggac
caagggggccccggagcgggggacgccgcttcgggcggctccggcggcgccggcgggagg
cccccgggcccggcgccacgtccgacgccaaagccgaagtacaaagcgaaatga
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