Hydrogenibacillus sp. N12: K2M58_05440
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Entry
K2M58_05440 CDS
T07426
Name
(GenBank) PASTA domain-containing protein
KO
K08724
penicillin-binding protein 2B
Organism
hyi
Hydrogenibacillus sp. N12
Pathway
hyi00550
Peptidoglycan biosynthesis
hyi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hyi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K2M58_05440
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyi01011
]
K2M58_05440
Peptidoglycan biosynthesis and degradation proteins [BR:
hyi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
K2M58_05440
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
QZA33947
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Position
1163129..1165363
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AA seq
744 aa
AA seq
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MRPADRTRGAPGAGIVRRGLLLAGGIVLLFLAVLGRLFYLQVLSAEPLVARAAVQWQAKE
TLPAKRGTIYDRNGTPLAVDGPAYDVIAVVSPRAPDHVVDPAQTAAALAPHLGMPAARIE
ALLRQPGRYQVEFRPGGWKISPETKAAIEALHLPGIVFVEDRRRYYPFGAFLAHTLGYVD
KEGEARMGLEAALDDVLAGRDGALKLLVDGGRRFLPGGVQDYVPPVDGKDVVLTIDQTIQ
TFVEDALDAAAEQVRAKHLLAVVANPKTLEVYALASRPHFDPNDYTRITNYLNLPVAFEF
EPGSTFKTITLAAAINEGVYNPDETYQAGVYRSKEIRPPIRDWNDVRGWGTIPFRDAFVR
SSNVGMTILGYERLGRERLARYYEAFGFGARTGIDLPGEAAGRVPDLRLVPPRDVASTTF
GQRIAVTPIQMVAAVSAAINGGTLMRPYVVRSIERRDEGIVYEAREPTAVRRVISPEASA
RVREAMAAVVESPVGTGRAFAIPGYRIGGKTGTAQKLSPDGTYRDGAYIYSFIGFAPLDD
PAVLVYVVVDEPDLPATSSGEVVAPIFKAIMSQTLAYLDIPPEGGGRRSAGGGSAAENGD
APAPDRLRDAPPAGEKRAADQAVPADGTAAGGAPPAAEQGVPPAADRGMPPAGEVERSAT
PAEEAKGDAPLTVSVPDVRGRSKKEAAALLQAAGLEADFDGTGYAVAQDPAPGSRVAAGT
AVRVRFEPPAPPPGASDAPSGSGG
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctgccgatcggacgcggggcgcgcccggcgccggcatcgtccggcgcgggctt
cttctcgccggcgggatcgtccttttgttcctcgccgtcctcggccgactcttttacctg
caggtgctctccgccgagccgctcgtcgctcgggccgcggtccagtggcaggcgaaggag
accctccccgcgaagcgggggacgatctacgaccggaacgggacgccgctcgccgtcgac
gggccagcgtacgacgtcatcgccgtggtgagcccccgggcgccggatcacgtcgtcgat
cccgcgcagacggcggcggcgctggccccccacctcggcatgcccgccgcgcgcatcgag
gcgcttctccggcagccggggcggtatcaggtggagttccggccgggcggctggaaaatt
tcgccggagacgaaggcggcgatcgaggcgctccatcttcccggcatcgtcttcgtcgag
gaccggcggcggtactacccgttcggcgcttttctggcccatacgctcgggtacgtcgat
aaggaaggcgaggcccggatgggcctggaggcggcgctggatgacgtcctcgccggacga
gacggggcgctcaagctcctcgtcgacggcggtcgccggttccttcccggcggcgttcag
gattatgtgccgcccgtcgacgggaaggatgtcgtgctcaccatcgaccagacgattcag
acgtttgtcgaggatgccctcgatgcggcggcggaacaggttcgggcgaagcatctcctt
gccgtcgtcgccaacccgaagacgctcgaggtttacgccctcgcttcccgcccccacttc
gacccaaacgactacactcggatcacgaactatctgaatctgccggtggcgtttgaattc
gagccggggtcgacgttcaagacgatcacgctggcggcggcgatcaacgagggcgtctac
aacccggacgagacataccaggccggcgtctatcggtcgaaggagatccggccgccgatc
cgggactggaacgacgtccggggctgggggacgatcccgtttcgggacgccttcgtccgc
tcgagcaacgtcggcatgacgatcctcggctacgagcgcctcggccgggagcggctcgcc
cgctactacgaagcgttcggcttcggggcccggacgggcatcgacctgccgggggaggcg
gcgggaagggtaccggaccttcgcctcgtcccgccccgggacgtggcctcgacgacgttc
ggccagcggatcgccgtaaccccgatccagatggtggcggcggtgagcgccgccatcaac
ggcgggacgctcatgcggccgtacgtcgtccggtcgatcgaacggcgggacgagggcatc
gtctatgaagcgcgggagccgacggcggtgcgccgggtgatttcgccggaggcgtcggcc
cgcgtgcgggaggcgatggccgcggtcgtggagtcgccggtggggacgggccgggcgttt
gccatccccggctaccggatcgggggcaaaaccgggacggcgcaaaagctcagcccggac
gggacgtatcgggacggggcgtatatttattcgttcatcggctttgcccccctcgacgac
ccggcggtgctcgtctacgtcgtcgtcgacgagccggatcttccggcgacgtcgagcggc
gaggtcgtggcgccgatctttaaggcgatcatgagccagacgctcgcctacctggacatc
ccgcccgaggggggcgggcgccggagcgccggcggcgggagcgccgcggaaaacggggat
gccccggcgccggatcggctccgcgacgcgcctccggccggtgaaaagcgggcggcggat
caggccgttccggcggatgggacggccgccggcggcgctccgcctgccgcggagcagggc
gttccgccggcggcggatcgggggatgcctcccgccggcgaagttgagaggagcgcgacg
ccggcggaggaggcgaaaggcgacgcccctttgacggtgtccgtgccggacgtccggggc
cgttcgaaaaaggaggcggcggcgctccttcaggcggcggggcttgaggccgacttcgac
ggaacgggatatgccgtcgcccaggatccggcgccgggaagccgggtcgcggccgggacg
gcggtccgggtccgcttcgagccgccggcgccgccgcctggggcatccgatgcgccgtcc
ggatcgggcggctga
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