Hydrogenibacillus sp. N12: K2M58_07225
Help
Entry
K2M58_07225 CDS
T07426
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
hyi
Hydrogenibacillus sp. N12
Pathway
hyi02020
Two-component system
hyi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hyi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K2M58_07225 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K2M58_07225 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyi03021
]
K2M58_07225 (rpoN)
Transcription machinery [BR:
hyi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K2M58_07225 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
HTH_24
HTH_23
HTH_21
LacI
Motif
Other DBs
NCBI-ProteinID:
QZA32133
LinkDB
All DBs
Position
1534841..1536214
Genome browser
AA seq
457 aa
AA seq
DB search
MSEPTVRLEPSLKTELRITAELKQSLDLLMLGLPELTSYIDELARENPALHVDPPLWQTS
GWATGRPRSKSRRVSNESDPYDPLSALRAPEPSLTDRLKAELRMRLLDSRLLRDACLIVD
ALDERGFLGVPLEALAERFARPLARLEAALVIVQSLDPPGIGARNLRECLHLQHRRLGEP
LPVLSAIIDEHLEDVARGRLEAIARRLRVPIEAVVEAVALLKTFNPRPGGEFAVEATVYV
IPEAAVQNDAGTLTVILYDDVLPRLSIDPAFARMERRLDLDPRTRDYVSRKIAHARKLID
QVQARKATLERVLEAVVRRQQEAFLHGPERLKPLTMQVIAEDVGLSVSTISRTVREKHIE
TPWGVIEFKRLFPSPVGGSGDEATPTTSDAIIRKIKAYIDAEDKTNPLSDEALAALLHQE
GVPVSRRTVAKYRAMAGIPSSHQRRSPGNGRSVTATP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaccgaccgtccgtctcgaaccgtccctcaaaaccgaactccggatcaccgcc
gagctgaaacaatcgctggacctcctcatgctcggcctccccgagctcacatcgtatatc
gacgaactcgcgcgtgaaaatccggcgcttcacgtcgatccccccctctggcagacgtcc
ggatgggcgaccggccgtccgcggagcaaaagtcgaagggtctcgaacgaaagcgacccg
tatgacccgctctccgccctccgggcgccggaaccctcgctcaccgatcgcctgaaagcc
gagctccgcatgcgcctgcttgactcccggcttttacgcgatgcctgtctcatcgtcgat
gcccttgatgaacggggattccttggcgtcccgctggaagcacttgcggaacgctttgcc
cgtccgcttgcgcgtcttgaagccgccctcgtcatcgtccagtcgcttgatcctcccggc
atcggcgcccggaacctgcgcgaatgcctccaccttcagcatcggcggctcggggagcct
ctgccggttttgtccgccatcatcgacgaacacctggaagacgtcgccagggggcggctt
gaggccatcgcccggcggcttcgcgtcccgatcgaagcggtcgtcgaggccgtggcgctc
ctcaaaacgtttaacccgcggcccggcggcgaattcgccgtcgaagcgaccgtgtacgtc
atccccgaggcggctgtccaaaacgacgcggggacgctcacggtgatcctctacgacgac
gttttgccacgcctctcgatcgaccccgcgtttgcccgaatggaacgccgactcgatctc
gatccccgcacgcgggattatgtctcccggaaaatcgcccacgcccgcaagctgatcgat
caggttcaggcgcggaaggcgactttagagcgcgtgctagaggcggtcgtccgccggcag
caggaagcctttctccacggaccggagcgactgaagccgcttacgatgcaggtcatcgcc
gaggacgtcgggctcagcgtctcgacgatctcccgcacggtgcgcgaaaagcacatcgaa
acgccgtggggggtcatcgaattcaaacgcctgttcccttcgccggtcggcggtagcggc
gatgaagccacgccgacgacatccgatgccatcatccgcaagatcaaagcctatatcgat
gccgaagacaaaacaaatccactgtccgacgaggcgctggccgccctgctccatcaagag
ggggtccccgtctcccgccggacagtggccaagtatcgcgcgatggcgggcatcccttcg
tcccatcagcgccggagcccgggaaacgggcgctccgttacagcgactccttag
DBGET
integrated database retrieval system
