Hydrogenibacillus sp. N12: K2M58_08845
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Entry
K2M58_08845 CDS
T07426
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
hyi
Hydrogenibacillus sp. N12
Pathway
hyi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K2M58_08845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyi03400
]
K2M58_08845
DNA repair and recombination proteins [BR:
hyi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
K2M58_08845
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
AAA_21
AAA_22
ALIX_LYPXL_bnd
FapA
Motif
Other DBs
NCBI-ProteinID:
QZA32418
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Position
complement(1888476..1890878)
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AA seq
800 aa
AA seq
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MDARTFVRLDYPEVLEALARSAATPLGARLARRLRPVGREDVVRRRLQATDEAVTFVRRF
GPPDFSGVGPVADAVRRAKKGGLLYPDALYRVLSFLRGIRRVRTAVRRPDGAEATYPALV
RLSDRLEAPAALYEALAGAIASESALKDEASPRLLELRRRLRAIDGEIRETLERLIRDPE
TRGALQEPVIMFRGGRPVLPVRADAKNRVRGIVHDVSSSGQTLFIEPEAIVALANVRRTV
EQEAAAEEERILRALTEEVAQAAVPLLVAEAHAAALDLLFAKAAYALAHGHARPNLGPPG
GPVALYDAYHPLLGDRAVKNDLLLEAGVRLLLITGPNTGGKTVTLKTIGLAALMAQSGLF
IPAREGSTLPVFDGVFADIGDEQSIAQNLSTFSSHMTQIVAILKRATGKSLVLLDEIGAG
TDPAEGVALASAILEALAERGARVVATTHFGELKALAGERPWAINASMAFDRETLRPTYR
LLLGVPGASHALEIARRLGLDEAIVRRAEARIGEAGRQAAAVAAELADRLQALEAERRRL
AAEREALEAKRRRLEAERERERRLLSERLAAAYARYRRRLEEVVRKGEAIARELEALHRE
AIAAGHVPPAVKPHEWIDRVGALRRAAAEAKAAADEAAPKEDRARGGRKPAPPGGRLLPG
STVLVRSHGLKGTLLELRPGGEAVVQLGVMKLTLPASDLVPVEGDKPPAPAGGVRVTVER
RAPFEVDLRGMTVEEAREALDEVLDRALLEGRDRLVVIHGLGTGALKRGVAEFLRRHPAV
KRFRSGEKEEGGSGVTIVEL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
gtggacgcacgaacgtttgttcggctcgattatccggaggtcctcgaggcgctggcccgt
tcggcggcgacgcccctcggggcgcggctcgcccggcggctcaggccggtgggacgggaa
gacgtcgtccgccggcggcttcaggcgaccgacgaagcggtgacgttcgtccgccggttc
gggccgccggacttttccggcgtcggccccgtcgccgacgccgtccggcgggcgaaaaaa
ggcggtctcctctatccggatgccctctaccgggtcctttcttttttgcgcgggattcgg
cgcgtgcggacggcggtccggcgtccggacggggcggaggcgacctatccggccctcgtg
cggctttcggaccggctggaggcgccggcggcgctttacgaggcgctcgccggggcgatc
gcctcggagtcggcgctcaaagacgaggcatcgccgaggcttctggaacttaggcggcgc
cttcgggcgatcgacggggagattcgggagacgctcgagcggctgatccgcgatccggag
acgcggggcgcgcttcaggagccggtgatcatgtttcgcggcggccggccggtgcttccg
gtccgggcggacgccaaaaaccgcgtccgggggatcgtccacgacgtgtcttcgtcgggc
cagacgcttttcatcgagccggaggcgatcgtcgccctcgccaacgtccggcgcaccgtc
gaacaggaggcggcggcggaagaagagcgcatcctccgggcgctcacggaagaggtcgct
caggcggcggtgccgcttttggtcgcggaagcgcacgcagcggcgctcgaccttctgttt
gccaaagcggcgtacgccctcgcccacggccatgcccggccgaacctcggcccgccgggc
ggcccggtggcgctgtacgacgcctatcacccgcttctcggcgaccgggcggtgaaaaac
gacctcctcctcgaggcgggcgtgcgcctcctcctcatcaccgggccgaacaccggcggg
aagacggtgacgctgaagacgatcggcctggccgcccttatggcccagtcggggctgttt
atccccgccagggaggggagcacgctgccggtgttcgacggcgtcttcgccgatatcggc
gacgagcaatcgatcgcccaaaacttgagcacgttttcctcccacatgacgcagatcgtc
gcgatcctcaagcgggcgacgggaaaaagcctcgtcctcctcgacgagatcggcgccggg
acggacccggcggagggggtggccctcgcttcggcgatcctcgaggcgctcgccgagcgg
ggcgcccgggtcgtggcgaccacgcacttcggggagctgaaggcgctggccggggagcgg
ccgtgggcgatcaatgccagcatggccttcgaccgggagacgctccggccgacgtatcgg
ttgctcctcggcgtgccgggggcgagccacgccctcgagatcgcccggcgcctcggcctc
gatgaggcgatcgtccggcgggccgaggcgcggatcggagaggcaggacgacaggcggcg
gcggtcgcggcggagctcgccgatcggttgcaggcgctcgaagcagagcgccgccgcctc
gcggcggagcgggaagcgctcgaggcaaaacggcgccgcctggaggcggagcgggagcgg
gaacggcggcttttgagcgagcgcttggccgccgcctacgcccgctaccggcgccggctg
gaggaggtcgtccggaagggcgaggccatcgcccgggagctcgaggccctgcatcgggag
gcgatcgccgcggggcacgtgccgccggccgtcaagccgcacgaatggatcgaccgcgtc
ggggccctccggcgggcggcggcggaggcgaaggcggcggcggacgaagcggcgccgaag
gaagaccgggcaaggggcggccgcaagccggcgcccccgggcggccggctgctcccgggg
tcgacggtcctcgtccgctcccacggcctcaagggaacgctcctcgagcttcgcccgggc
ggcgaagccgtcgtgcagctcggggtgatgaagctgacgctgccggcgtccgatctggtg
ccggtggagggagacaagccgccggcgccggccggcggcgttcgggtgacggtggaacgc
cgggcgccgtttgaggtggaccttcgggggatgacggtggaggaggcccgggaggcccta
gacgaggtgctcgatcgggcgctcctcgaggggcgggaccggctcgtcgtcatccacggc
ctcggcaccggcgccttgaagcggggcgtcgccgagttcttacgccgtcatccggcggtg
aagcgtttcagaagcggtgaaaaggaagaaggcggaagcggcgtcacgatcgtcgaactg
taa
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