Hydrogenibacillus sp. N12: K2M58_09425
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Entry
K2M58_09425 CDS
T07426
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hyi
Hydrogenibacillus sp. N12
Pathway
hyi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K2M58_09425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyi03400
]
K2M58_09425
Enzymes [BR:
hyi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
K2M58_09425
DNA repair and recombination proteins [BR:
hyi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K2M58_09425
Prokaryotic type
K2M58_09425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QZA34272
LinkDB
All DBs
Position
complement(2005779..2006642)
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AA seq
287 aa
AA seq
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MLKNDWNDVLGTEFEKPYYQALRRFLIEEYRSTTVYPDMYDIYNAFHYTPYASVKVVILG
QDPYPGPNQAHGLAFSVRPGVEVPPSLANIFKELEADLGLPRPKHGHLVHWARQGVLLLN
AVLTVRAGQPGSHRGKGWEKLTDAAIAALGARPVPTVFFLWGRDAQAKRPLITYPGHLVL
TAPHPSPLSAARGFFGSRPFSKANQFLEAVGRGPIDWRLPEAPEADEAPERPGRGSSAGR
AVARRPDAAGGGEAIGGPSGGLGSDDGALTAAHQSTGSVGGEGRRWG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
attttgaaaaacgactggaacgacgtcctcgggacggagttcgaaaagccgtattatcag
gcgctccgccgttttctcatcgaggagtaccggtcgacgacggtctatcccgacatgtat
gatatctacaatgccttccactatacgccgtatgcgtcggtgaaggtcgtcatcctcggc
caggatccttaccccggaccgaatcaggcccacggcctcgccttttctgtccggccgggg
gtggaggtgccgccgtctctggccaacatatttaaggagctggaggcggacctcggtctt
ccccggccgaagcacggtcacctcgtccactgggcgcggcaaggggtgctcctcctcaat
gcggtgctgacggtccgggccgggcagccgggatcgcaccggggaaagggctgggaaaag
ctgacggacgcggcgatcgccgccctcggggcgcgaccggtgccgacggtgttctttctc
tgggggcgggacgcccaggcgaagcgtccgctcatcacgtatccgggccacctcgtgctc
acggcgccgcatccgagcccgctttcggcggcgcgggggtttttcggctcacggccgttt
tccaaggccaaccagttcctcgaggcggtcggccggggcccgatcgactggcgcctgccg
gaggcgccggaggcggacgaagcgccggagcgcccggggcgcgggtcgtcggccggccgt
gcggtggcccgtcggccggacgcggcgggcggcggagaggcgatcggcggcccgtccgga
ggtttgggttccgacgacggggctctgacggcggcgcatcagagcaccgggtcggtcggc
ggagaagggagacgatggggatga
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